SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR101480_c0_g1_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_bifunctional_arginine_demethylase_and_lysyl-hydroxylase_PSR_[Papilio_xuthus]
Ontology
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0018395 P peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
GO:0035212 P cell competition in a multicellular organism
GO:0043066 P negative regulation of apoptotic process
GO:0046329 P negative regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070815 F peptidyl-lysine 5-dioxygenase activity
Transcript
Level		FPKM:35.93 TPM:47.86
ORF EntryO_BomoN4EE51631_complete:A_BomoN4EE_TR101480_c0_g1_i1
Sequence
(Nucleotide)
AGATGTCTATGGGCTCCAGTAACCACTTAACACCAGGTGGCCTGTGAGCTCGTACACACA
TACAAGCAATAAAAAAATAATTAAAAGCTAATGAAATAATTAGTATACATATAATTTTGC
AAAGATCAACACTTCTGTGATTAACTAATTAAATGATTAGGTCTGGTTCTGATGAAGTTA
GTAATTGTTTTCGTATACTCAAAGCTTCTTTCTCCGCTTTTTCTTGTGGGCAGTGATGCT
TTCCTGGCCGCTATCTTCTTCTGAACTATCTGAAGAGCTAGTGTCACTATCACTGCTTGA
AGAACTGCTGTTAGATGAACTGTCTGAAGCCACTCCAGTACTCTGGTTGACGTCAACACT
GCTTGCTATCTTATATAAATCAGGTTCTTTGGCTTCCAAGACCTTGAGCCATTTTTTGGA
GAGCTTTGGTCGACCTCGGACGGACTTATGCCACACTACCGGGAAGTTGGTGCGACTGCA
GAAGTTTTGGGTGATGGCTACTGTGTCATCTAAGTTCAAGACCACATGCCACCAGCCTCC
AGGCACAAACACCGTATCCCCAGGTCTTTGAAGTATCTCCACCGGTTGATACTCTTTCGG
CCAAGTGTCCAACTGAGTCTTTGGATAAATTAATTTAAACCATGTTATAGCTTCGTCCCT
TTGTTTTCCCCCCATAGCCCCTGTCACTTTAATCATTTCCCTTGGAGTCTGAGTTGGGAA
CAGGCACCATCTTTTATGTCCAAAAACTAAAGCATTCCAAGCACTAGTCCCTAAAGGATC
AATATGAATCCCAGTACCAGATCTTTGGGGACCCATGACAAACCAGCGATAAGGTGGTCT
CCTCTCTTCACCACAATATTTAAACAAATCATCCCTAAAATATAAAGGAACGTCATAGTC
CTCTAGGAGTTTTTTTCTTCTTGGGTGCTCCCCAAAACTGCTATCAAAAATATACAGTGG
ACTATCATCAATGGTGGTTCTCATATATTCTACATAATACTTCATTTTCATCTTAACACT
ATAGCCATCATTGTCTTCACCACACTTGAATTTTTGATTCCGATATTTTTTAACAAGTCG
GTCTAAAGTCCACTTGTAATTTGCTTTCCAGTTAGTTTGCACATCAGTTATGACTACAGG
TTTATATATTTTCTCATATTTCTCAATGAATTCTTCAGGTGTGACTTGAATAGCACTAAT
TCGGTCAACATTGTCCTTGCACTGGAGGAACTCAGTAAAGTTGTTGTGGTATTTTAGTAT
GGTCCACTGATGTTTATCGACTAATTCGGGTCTGGCTTTTCTTTTCGCTTCTTTAATTCG
TTTCTTAGTTTTGTGAGACAGTTTATATTCACTGTCCATTCTATGAGCAAGTTTTAGTAT
AATTTATTAATTGGTTTGCTGTTCAAATAAGTACTAGTTGAAGAATTTAAGCAGCGATTA
TCTTTAGATTGAGAGGGCTATGTACACAGAGTACAG
(1476 bp)

- SilkBase 1999-2023 -