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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1921 A_BomoN4EE_TR101221_c0_g1_i1
370bp
FPKM:0.43 TPM:0.57
1922 A_BomoN4EE_TR101221_c0_g2_i1
3487bp
 PREDICTED:_TIP41-like_protein_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0043009 P chordate embryonic development
GO:0043066 P negative regulation of apoptotic process
FPKM:15.89 TPM:21.17
1923 A_BomoN4EE_TR101221_c0_g2_i2
3502bp
 PREDICTED:_TIP41-like_protein_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0043009 P chordate embryonic development
GO:0043066 P negative regulation of apoptotic process
FPKM:2.83 TPM:3.77
1924 A_BomoN4EE_TR101222_c0_g1_i1
1253bp
FPKM:0.60 TPM:0.80
1925 A_BomoN4EE_TR101222_c0_g2_i1
2115bp
 hypothetical_protein_RR48_15070_[Papilio_machaon]
FPKM:2.59 TPM:3.45
1926 A_BomoN4EE_TR101223_c0_g1_i1
551bp
 putative_high_mobility_group_protein_[Danaus_plexippus]
FPKM:1.12 TPM:1.49
1927 A_BomoN4EE_TR101223_c0_g2_i1
485bp
 putative_high_mobility_group_protein_[Danaus_plexippus]
FPKM:0.31 TPM:0.42
1928 A_BomoN4EE_TR101223_c1_g1_i1
405bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:1.50 TPM:2.00
1929 A_BomoN4EE_TR101223_c2_g1_i1
261bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.38 TPM:0.51
1930 A_BomoN4EE_TR101224_c0_g1_i1
648bp
 Tkr_[Operophtera_brumata]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007418 P ventral midline development
GO:0008049 P male courtship behavior
GO:0008346 P larval walking behavior
GO:0019233 P sensory perception of pain
GO:0030536 P larval feeding behavior
GO:0031987 P locomotion involved in locomotory behavior
GO:0042332 P gravitaxis
GO:0048060 P negative gravitaxis
GO:0048477 P oogenesis
FPKM:0.00 TPM:0.00
1931 A_BomoN4EE_TR101224_c0_g2_i1
2218bp
 PREDICTED:_protein_jim_lovell_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007418 P ventral midline development
GO:0008049 P male courtship behavior
GO:0008346 P larval walking behavior
GO:0019233 P sensory perception of pain
GO:0030536 P larval feeding behavior
GO:0031987 P locomotion involved in locomotory behavior
GO:0042332 P gravitaxis
GO:0048060 P negative gravitaxis
GO:0048477 P oogenesis
FPKM:0.74 TPM:0.99
1932 A_BomoN4EE_TR101225_c0_g1_i1
292bp
FPKM:0.00 TPM:0.00
1933 A_BomoN4EE_TR101225_c0_g2_i1
402bp
 hypothetical_protein_[Sedimentitalea_nanhaiensis]
FPKM:1.24 TPM:1.66
1934 A_BomoN4EE_TR101225_c1_g1_i1
281bp
 transcriptional_regulator,_AraC_family_protein_[Reinekea_sp._MED297]
FPKM:0.62 TPM:0.83
1935 A_BomoN4EE_TR101226_c0_g1_i1
334bp
 reverse_transcriptase_[Lasius_niger]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.43 TPM:0.57
1936 A_BomoN4EE_TR101226_c0_g2_i1
1011bp
 reverse_transcriptase_[Lasius_niger]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.35 TPM:1.79
1937 A_BomoN4EE_TR101226_c0_g2_i2
891bp
 reverse_transcriptase_[Lasius_niger]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.45 TPM:0.60
1938 A_BomoN4EE_TR101227_c0_g1_i1
793bp
FPKM:0.48 TPM:0.64
1939 A_BomoN4EE_TR101227_c0_g2_i1
1116bp
FPKM:0.38 TPM:0.50
1940 A_BomoN4EE_TR101228_c0_g1_i1
1030bp
 PREDICTED:_uncharacterized_protein_LOC105841624_isoform_X1_[Bombyx_mori]
FPKM:0.87 TPM:1.15
1941 A_BomoN4EE_TR101229_c0_g1_i1
387bp
FPKM:0.60 TPM:0.79
1942 A_BomoN4EE_TR101229_c0_g2_i1
369bp
FPKM:0.33 TPM:0.44
1943 A_BomoN4EE_TR101229_c0_g3_i1
327bp
FPKM:1.91 TPM:2.55
1944 A_BomoN4EE_TR10122_c0_g1_i1
457bp
FPKM:0.11 TPM:0.15
1945 A_BomoN4EE_TR101230_c0_g1_i1
1265bp
 olfactory_receptor_[Bombyx_mori]
FPKM:4.98 TPM:6.63
1946 A_BomoN4EE_TR101230_c0_g2_i1
401bp
 pectate_lyase_[[Clostridium]_straminisolvens]
FPKM:0.28 TPM:0.37
1947 A_BomoN4EE_TR101231_c0_g1_i1
8056bp
 PREDICTED:_autophagy-related_protein_9A_[Bombyx_mori]
GO:0000421 C autophagosome membrane
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
FPKM:3.20 TPM:4.26
1948 A_BomoN4EE_TR101231_c0_g2_i1
1907bp
 PREDICTED:_autophagy-related_protein_9A_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0000421 C autophagosome membrane
GO:0000422 P autophagy of mitochondrion
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0032688 P negative regulation of interferon-beta production
GO:0034067 P protein localization to Golgi apparatus
GO:0034497 P protein localization to phagophore assembly site
GO:0034727 P piecemeal microautophagy of the nucleus
GO:0044805 P late nucleophagy
GO:0045087 P innate immune response
GO:0055037 C recycling endosome
FPKM:0.17 TPM:0.22
1949 A_BomoN4EE_TR101231_c0_g3_i1
3440bp
FPKM:6.36 TPM:8.47
1950 A_BomoN4EE_TR101232_c0_g1_i1
252bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:3.40 TPM:4.53
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