SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR101231_c0_g2_i1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_autophagy-related_protein_9A_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0000421 C autophagosome membrane
GO:0000422 P autophagy of mitochondrion
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0032688 P negative regulation of interferon-beta production
GO:0034067 P protein localization to Golgi apparatus
GO:0034497 P protein localization to phagophore assembly site
GO:0034727 P piecemeal microautophagy of the nucleus
GO:0044805 P late nucleophagy
GO:0045087 P innate immune response
GO:0055037 C recycling endosome
Transcript
Level		FPKM:0.17 TPM:0.22
ORF EntryO_BomoN4EE51480_complete:A_BomoN4EE_TR101231_c0_g2_i1
Sequence
(Nucleotide)
GTTCAGCTGTCACTCGTGGTTTATTTTCGTCATTTCATTTGTTAAGTGAACATACACATT
TCAACCTTTATTGTTCGGAGACTTACAAAATTTTTGTATCCTTGAAATTATTATGTTCGT
TTTGATAAAGGTAATAACATTGTATAAAATTAGGGCTAATTACCAGTTCAAAAACAAAGG
ATTTGAATTTTTTGTTTGAAATTAAGTCGTAATGTTTTGAAAAGTTATACTTTACGTTTC
TGAAACGTAGTAAATAATGTGTAGATAGTACATGGCCTCTTTAAAACGCAATAAGGCGTC
GTAATCTTAGTTAGACATAATAAAACGTAATTTAGCAATGGCTTACTTCGGAAGACGCGA
TGTTACGTATAGTGCCCTGAGCAACGAAATCACTCCACCTTTAGGTGGATTGGCTGACAA
TGTGAACATAACGTCGCCTAAAGGCAGTGTAGATGCTGATCATGAAGATTACAGTAAGGT
GATCATCCACGAAGTGCCAAAAACGAAAGGAGGATGGAATCACATAGATGATTTAGATTC
ATTCTTTGTCAGAATGTATAGATATTATGTGAGAGGAGGCTTTTATCCAATGATAATGTC
AGATTTGTTTTGTCTGCTACAATTGATTTTTATCATGTGGTTCTCAACATTTCTCGTGCA
CTGTGTAAATTATCCCAGATTGTTCAGGAATGATGAAATCGCAAACCGAAGTGAAAAACT
CAGCTTGAATGATGTAATATATCCAACAGATGAGTGTATTGAGAGCATATCATGGAAATG
GTGGTGTCTCATTGTTTTATGTTCTGTCATATGGATTATGAGATTGTTCCTGTCGATTTA
CCAATTATACTATGCATATGATACAAAGCTATTTTACAACAATGCCCTCAAAATTAACGA
GAGTGATCTGGCCTGGGTGAACTGGTCAACAATACAAGATAGGGTACGTGAAGCACAACC
TGAACATCACATGTGTGTTCACAAGCAAGAGATAACAGAATTAGATATATACCATAGGAT
ACTCAGGTTCACAAATTACATGGTGGCAATGGTTAACAAGAATTTACTGCCATTGCAAAT
ACATATACCATGCGTTGGTAACTTTCATTATCTGTCGAGAGGTTTGAAATGGAACTTGGA
GTTTCTCTTGTTTTCTAGTCCGTGGAGTCCATGGGAGAACTGCTGGCAGCTCCGTAGATG
CTACAAGGAACATTCAAAGAGAATGATTCTGGCACGACAACTCCAAAGGCAGATTGTTGT
TCTTGCATTACTCAATTTTCTCCTTGCACCATTTATTCAAGCCTGGCAAATATTGTATTT
CTTCTTCAACTACGCTGAGTTAATAAAACGGTCGCCTGGATCGTTAGGGCTTCGTACGTG
GTCTTTATACGCTCGCGTCACCCTGAGGCATTTCAATGAGCTCGAACACGAACTACGCGA
CCGACTGAACCGAGCCCACAAGCCCGCGACGAAGTACCTCGCCAGCTTCACATCGCCCAT
AACTACTGTTATAGCCAAAAATGTAGTGTTTCTCTCGGCCAGCGTGTTGGGTGTTTTGGT
CTTCCTGTCCGTCTATGATGAAGACGTGCTCACTGTGGAACACGTGCTCACTATCATAAC
GGTTCTCGGGTGTGTTGTGGCCGGCGCAAGGTAAGAGTAGTTAAATACTGTTTTATGTAC
TTATTTATTTAGGCATTACTTGATTTCGTGCATACTGATAAACACTAGAAGAACATTATA
CATCTAAGTATCGCTTAAGATAATAAAACCTTATGTACATTTACAATGGATATAATTCCG
TGTTTAGACAAATATGCGCACGCTTGTTCAATAGCAGTAACAAAAAACGAACAAGAATCA
TGTGGGTAAGGATTATTTGTCCAATATTACATAATTATGTGGGAACG
(1907 bp)

- SilkBase 1999-2023 -