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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1351 A_BomoN4EE_TR100826_c0_g1_i1
427bp
FPKM:0.49 TPM:0.66
1352 A_BomoN4EE_TR100827_c0_g1_i1
2453bp
FPKM:0.86 TPM:1.14
1353 A_BomoN4EE_TR100828_c0_g1_i1
373bp
FPKM:0.64 TPM:0.85
1354 A_BomoN4EE_TR100829_c0_g1_i1
323bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.66 TPM:0.87
1355 A_BomoN4EE_TR10082_c0_g1_i1
315bp
FPKM:0.46 TPM:0.62
1356 A_BomoN4EE_TR100830_c0_g1_i1
342bp
FPKM:0.00 TPM:0.00
1357 A_BomoN4EE_TR100831_c0_g1_i1
368bp
 PREDICTED:_nucleolar_complex_protein_3_homolog_[Bombyx_mori]
FPKM:0.16 TPM:0.22
1358 A_BomoN4EE_TR100832_c0_g1_i1
300bp
 PREDICTED:_UPF0769_protein_C21orf59_homolog_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0048858 P cell projection morphogenesis
FPKM:0.52 TPM:0.70
1359 A_BomoN4EE_TR100833_c0_g1_i1
1675bp
 PREDICTED:_uncharacterized_protein_LOC101744325_[Bombyx_mori]
FPKM:2.05 TPM:2.73
1360 A_BomoN4EE_TR100833_c0_g2_i1
1674bp
 PREDICTED:_uncharacterized_protein_LOC101744325_[Bombyx_mori]
FPKM:24.53 TPM:32.68
1361 A_BomoN4EE_TR100834_c0_g1_i1
537bp
 hypothetical_protein_OCBIM_22038896mg,_partial_[Octopus_bimaculoides]
GO:0001501 P skeletal system development
GO:0002230 P positive regulation of defense response to virus by host
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007517 P muscle organ development
GO:0035329 P hippo signaling
GO:0098792 P xenophagy
FPKM:0.67 TPM:0.90
1362 A_BomoN4EE_TR100835_c0_g1_i1
262bp
FPKM:0.38 TPM:0.51
1363 A_BomoN4EE_TR100836_c0_g1_i1
1226bp
 immunoglobulin-binding_protein_1b_[Papilio_polytes]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0008601 F protein phosphatase regulator activity
GO:0009966 P regulation of signal transduction
GO:0019904 F protein domain specific binding
GO:0031434 F mitogen-activated protein kinase kinase binding
GO:0032403 F protein-containing complex binding
GO:0032873 P negative regulation of stress-activated MAPK cascade
GO:0034047 P regulation of phosphoprotein phosphatase activity
GO:0034612 P response to tumor necrosis factor
GO:0035306 P positive regulation of dephosphorylation
GO:0035308 P negative regulation of protein dephosphorylation
GO:0042113 P B cell activation
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051721 F protein phosphatase 2A binding
GO:0060632 P regulation of microtubule-based movement
GO:0070555 P response to interleukin-1
GO:2001234 P negative regulation of apoptotic signaling pathway
FPKM:18.65 TPM:24.85
1364 A_BomoN4EE_TR100837_c0_g1_i1
285bp
FPKM:0.00 TPM:0.00
1365 A_BomoN4EE_TR100838_c0_g1_i1
296bp
FPKM:0.81 TPM:1.08
1366 A_BomoN4EE_TR100839_c0_g1_i1
241bp
FPKM:0.49 TPM:0.66
1367 A_BomoN4EE_TR10083_c0_g1_i1
396bp
 PREDICTED:_uncharacterized_protein_LOC106121570_[Papilio_xuthus]
FPKM:0.14 TPM:0.19
1368 A_BomoN4EE_TR100840_c0_g1_i1
2037bp
 PREDICTED:_GTP-binding_protein_10_homolog_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0003674 F molecular_function
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0042254 P ribosome biogenesis
FPKM:14.75 TPM:19.64
1369 A_BomoN4EE_TR100841_c0_g1_i1
5403bp
 PREDICTED:_proteasome_activator_complex_subunit_4-like_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
FPKM:9.41 TPM:12.54
1370 A_BomoN4EE_TR100841_c0_g2_i1
5404bp
 PREDICTED:_proteasome_activator_complex_subunit_4-like_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0030154 P cell differentiation
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
FPKM:0.22 TPM:0.30
1371 A_BomoN4EE_TR100842_c0_g1_i1
411bp
FPKM:0.13 TPM:0.18
1372 A_BomoN4EE_TR100843_c0_g1_i1
1545bp
 olfactory_receptor_[Bombyx_mori]
FPKM:9.28 TPM:12.37
1373 A_BomoN4EE_TR100844_c0_g1_i1
3061bp
 PREDICTED:_leucine-rich_repeat-containing_protein_24-like_[Amyelois_transitella]
GO:0005518 F collagen binding
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0007409 P axonogenesis
GO:0007596 P blood coagulation
GO:0007599 P hemostasis
GO:0009986 C cell surface
GO:0010544 P negative regulation of platelet activation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0070062 C extracellular exosome
FPKM:0.99 TPM:1.32
1374 A_BomoN4EE_TR100845_c0_g1_i1
1133bp
 PREDICTED:_uncharacterized_protein_LOC106132622_isoform_X1_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0008285 P negative regulation of cell population proliferation
GO:0043065 P positive regulation of apoptotic process
GO:0043517 P positive regulation of DNA damage response, signal transduction by p53 class mediator
FPKM:132.93 TPM:177.07
1375 A_BomoN4EE_TR100846_c0_g1_i1
1753bp
 PREDICTED:_uncharacterized_protein_LOC106707689_[Papilio_machaon]
FPKM:16.73 TPM:22.29
1376 A_BomoN4EE_TR100847_c0_g1_i1
352bp
FPKM:0.18 TPM:0.24
1377 A_BomoN4EE_TR100848_c0_g1_i1
1846bp
 enolase_[Bombyx_mori]
GO:0000015 C phosphopyruvate hydratase complex
GO:0000287 F magnesium ion binding
GO:0004634 F phosphopyruvate hydratase activity
GO:0005737 C cytoplasm
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0006096 P glycolytic process
GO:0010906 P regulation of glucose metabolic process
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
FPKM:283.83 TPM:378.06
1378 A_BomoN4EE_TR100849_c0_g1_i1
303bp
FPKM:0.00 TPM:0.00
1379 A_BomoN4EE_TR10084_c0_g1_i1
622bp
 DNA-3-methyladenine_glycosylase_[Streptococcus_sp._DD10]
FPKM:0.20 TPM:0.27
1380 A_BomoN4EE_TR100850_c0_g1_i1
1827bp
 Mitochondrial_2-oxodicarboxylate_carrier_[Papilio_xuthus]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:16.25 TPM:21.65
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