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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1321 A_BomoN4EE_TR1007_c0_g1_i1
393bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X1_[Papilio_polytes]
FPKM:0.43 TPM:0.58
1322 A_BomoN4EE_TR100800_c0_g1_i1
1897bp
 fatty-acyl_CoA_reductase_1_[Ostrinia_nubilalis]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
FPKM:25.24 TPM:33.62
1323 A_BomoN4EE_TR100800_c0_g2_i1
1898bp
 fatty-acyl_CoA_reductase_1_[Ostrinia_nubilalis]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
FPKM:3.26 TPM:4.34
1324 A_BomoN4EE_TR100801_c0_g1_i1
431bp
FPKM:0.36 TPM:0.49
1325 A_BomoN4EE_TR100802_c0_g1_i1
2980bp
 PREDICTED:_26S_proteasome_non-ATPase_regulatory_subunit_2_isoform_X2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0022624 C proteasome accessory complex
GO:0030234 F enzyme regulator activity
GO:0042176 P regulation of protein catabolic process
GO:0050790 P regulation of catalytic activity
FPKM:102.89 TPM:137.05
1326 A_BomoN4EE_TR100803_c0_g1_i1
970bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_26S_proteasome_non-ATPase_regulatory_subunit_10-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007253 P cytoplasmic sequestering of NF-kappaB
GO:0008134 F transcription factor binding
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0030307 P positive regulation of cell growth
GO:0031398 P positive regulation of protein ubiquitination
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043066 P negative regulation of apoptotic process
GO:0043409 P negative regulation of MAPK cascade
GO:0043518 P negative regulation of DNA damage response, signal transduction by p53 class mediator
GO:0045111 C intermediate filament cytoskeleton
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0070682 P proteasome regulatory particle assembly
GO:0090201 P negative regulation of release of cytochrome c from mitochondria
FPKM:71.10 TPM:94.71
1327 A_BomoN4EE_TR100804_c0_g1_i1
470bp
FPKM:0.52 TPM:0.70
1328 A_BomoN4EE_TR100805_c0_g1_i1
3276bp
 Irregular_chiasm_C-roughest_protein_[Papilio_xuthus]
GO:0001745 P compound eye morphogenesis
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007409 P axonogenesis
GO:0007520 P myoblast fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016202 P regulation of striated muscle tissue development
GO:0030165 F PDZ domain binding
GO:0042802 F identical protein binding
GO:0045177 C apical part of cell
GO:0046331 P lateral inhibition
GO:0046666 P retinal cell programmed cell death
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048749 P compound eye development
FPKM:13.59 TPM:18.10
1329 A_BomoN4EE_TR100806_c0_g1_i1
294bp
FPKM:1.10 TPM:1.47
1330 A_BomoN4EE_TR100807_c0_g1_i1
576bp
 PREDICTED:_peptidoglycan_recognition_protein-like_isoform_X2_[Bombyx_mori]
FPKM:0.53 TPM:0.71
1331 A_BomoN4EE_TR100808_c0_g1_i1
347bp
 predicted_protein_[Botrytis_cinerea_T4]
FPKM:0.56 TPM:0.74
1332 A_BomoN4EE_TR100809_c0_g1_i1
3511bp
 protein_kinase_C_inhibitor_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0009154 P purine ribonucleotide catabolic process
GO:0016787 F hydrolase activity
GO:0050850 P positive regulation of calcium-mediated signaling
GO:0070062 C extracellular exosome
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
FPKM:33.60 TPM:44.75
1333 A_BomoN4EE_TR10080_c0_g1_i1
289bp
 PREDICTED:_histone-lysine_N-methyltransferase_SETMAR-like_isoform_X1_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1334 A_BomoN4EE_TR100810_c0_g1_i1
309bp
 PREDICTED:_TBC1_domain_family_member_22B_[Amyelois_transitella]
FPKM:1.22 TPM:1.62
1335 A_BomoN4EE_TR100811_c0_g1_i1
436bp
 hypothetical_protein_[Treponema_pedis]
FPKM:0.24 TPM:0.32
1336 A_BomoN4EE_TR100812_c0_g1_i1
271bp
 aromatic_ring_hydroxylase_[Salinispora_pacifica]
FPKM:1.38 TPM:1.83
1337 A_BomoN4EE_TR100813_c0_g1_i1
932bp
 PREDICTED:_nuclear_protein_localization_protein_4_homolog_[Bombyx_mori]
FPKM:0.67 TPM:0.89
1338 A_BomoN4EE_TR100814_c0_g1_i1
932bp
 hypothetical_protein_RR48_14481_[Papilio_machaon]
FPKM:0.39 TPM:0.52
1339 A_BomoN4EE_TR100815_c0_g1_i1
228bp
hypothetical_protein_[Bacillus_phage_vB_BanS-Tsamsa]
FPKM:0.60 TPM:0.80
1340 A_BomoN4EE_TR100816_c0_g1_i1
311bp
 acetylpolyamine_aminohydrolase_[Stappia_stellulata]
FPKM:0.72 TPM:0.96
1341 A_BomoN4EE_TR100817_c0_g1_i1
871bp
 PREDICTED:_ADP-ribosylation_factor-like_protein_16_[Bombyx_mori]
FPKM:2.39 TPM:3.19
1342 A_BomoN4EE_TR100818_c0_g1_i1
468bp
FPKM:0.95 TPM:1.26
1343 A_BomoN4EE_TR100819_c0_g1_i1
1696bp
FPKM:22.44 TPM:29.89
1344 A_BomoN4EE_TR10081_c0_g1_i1
493bp
FPKM:2.80 TPM:3.73
1345 A_BomoN4EE_TR100820_c0_g1_i1
283bp
FPKM:0.31 TPM:0.41
1346 A_BomoN4EE_TR100821_c0_g1_i1
312bp
FPKM:0.95 TPM:1.27
1347 A_BomoN4EE_TR100822_c0_g1_i1
387bp
FPKM:0.60 TPM:0.79
1348 A_BomoN4EE_TR100823_c0_g1_i1
254bp
 hypothetical_protein_[Spiroplasma_eriocheiris]
FPKM:0.42 TPM:0.56
1349 A_BomoN4EE_TR100824_c0_g1_i1
386bp
FPKM:0.30 TPM:0.40
1350 A_BomoN4EE_TR100825_c0_g1_i1
332bp
 THO_complex_subunit_1_[Papilio_machaon]
FPKM:4.31 TPM:5.75
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