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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100841_c0_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_proteasome_activator_complex_subunit_4-like_[Bombyx_mori]
Ontology
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
Transcript
Level		FPKM:9.41 TPM:12.54
ORF EntryO_BomoN4EE51285_complete:A_BomoN4EE_TR100841_c0_g1_i1
Sequence
(Nucleotide)
GTATCATACCGTACCTATACCTACATACTACATAATCTCGTCGAGCAATTTTGGTTTTAC
TTCTGTGGAGTGAATTGTATTTCCATTTGTGTGCATTTGTGCGTAAATTTTATTATGATG
ACTAGTAAAATAAGGTTTCAATCCGCTATTAATGAATCGAGAGTACTGTAAATTTAACAT
AAGAAAGAGTTCTCTATTTTTCTATTTTGTGCTTTTTTTAAAACGGATGACTTAAATCTG
CGCAGTGACTTGTACTTTTTATAAAAAAAACAGTGGGAAAATAATTCACAAAATGATACA
GGACGATGAATATGAACTTCTGGTAACTACCCCAGAGCGAATTAAAGCTCTGGGGTTCAA
ACCTCAGAAGGAATTTTTGACGAATCACTTATTGCCATATGCCAGTGAGCTTGACGAAGA
ATCGACCAGATTTTTAGGACAAGTGAAGATAAACTTGGCGAAGTCTGTTATGTTACGAGA
GATGAAGCCAGCATGTGGAGTCTGGCTTTCTAGATTAATGAAGTACATAAGAATTTATGG
ACTAAAGTTCAGTAAAGCTGACCACATAGACCTCATCAAATTGGCATATGAGCTTATTAT
CATTCCAGATCTTGAACCTAGCAAAGTTCATAAGTTTAGTACAATGTTCATTATGCTCAC
AAAAAAGAGACAACTGATTTCACCAGAAGAACTGAAACTTCCCTGGAGACCTCTATATGA
CTTAGGACAAAGAATATTCGATAAGAATGCGCTTCATGTTGGAATGTTTCATTATATTAG
TTCTCTGGAAAGTTCATATGTTGCATTGGTGAAGTGCGCAAGACCATATTTCGAATTGAG
CGCAACAAAGGAGATATTAGACTTGTTACTACCTCGAATCAACCCCTGGACAGCGGACTC
GTATGTATTGAGTCAACTGGTAGTATTTCTTCCTGTTGCATTACATCCCCGGAACTCGGC
GTTAGGTCACGAACTTTGGTTTGAGAAGCTGATGGTTTTATGGGACACTTGCTACAATGC
TCAGTGTGGAGTATGGGATCTGATGATAATATTTACTGGTCTGGCAAAGAGAAATCCCGG
TGTGATAAACTGGTCACAGTATGCTCCTAGAATATTCTCGAGATTCCTTCATGCATTAAA
TCTTCCCGTCAGTTATAAAGATATGCAAATTAACAATCACTACACTCTTGATACAAAACA
CATGGCCTCGTGGATTGTATGGAGTATCTGCCCCGATGGAGTGGTTCTTAAACACCTGCG
TTGTTTTATGGGAGGCGTAGAAAGTTACTTGCACAGTGCGAACTCGGGTCGATGGTCATA
TAAACTTAGGGACTTTCTAAAAAAGCTTACCAAAGAATTCCTAAACAGGTATCGTCGAGA
AACTGAGCACAAATTTAAAGAGAGCTGGGAGAATCAAGTACCTGAACATTACAAACTGAG
AGAAGAAGATATAACTGAGTTCATAAACATAGTTTTAGAACCTACATTGCAAGCTTTGTA
TAATCGAGTCGACAGTCTTGAAGTATCATTTGCCTTACAAAATTTAGCTACACTGCGACC
TGCTATCGTTATTCCACCGTTGCTGGAAAAATTTAAGACTTCCTTGAATTCCCTGACCGA
GCCCCATAGAGTCACGGCCGCCATGTCCGGGCTGGCCGCAGTCGCCAGGCCGATGGTGCG
AGGTCCCGACGCCGGTTATTTGGAAGGTCCCACTCATATCGTCCACATCCTGATGGCCGT
GCTCCCAGGTCTCGATCCGAACGATATCAAGAAAACATTGGTTTCCCTTCATTTTATTTT
GTTCTTCAGTTGGATGGTGCCGTTGATAGATTGTAGTTCGGCTCACGAATACTGGCCGGA
TCTGACCGAGGAGGAATTGCTGACGTGCGAGTCGACCGCGCAGATTGAAGACTTCGTTTT
AGTTTTCTTTGAGAAGATTTTCTCGATCGTAGAATCCAGTGTACTAGAACACGTGCGCTT
GGACACCAAAGAGTCGGACGGGATGCGAAGTAAGGCTGATGCGGTCATGGAGGCGGCGTT
GTCTTCTGCTACAACTGCTGTGCTAATGCAGTGCTCTCCTAAAATATTTAAGGAGGCTCT
GAGGAAGTTCAAATCGTTCGCCACGCAGACCACGTTTGAGACAAACGTGTCTGGCAGTAT
GGTCGGGGTGTTGCTCCGTGTGTTTGCTCGAGTCGACCCCGAATCGACATTAGCCGCATT
TCTGCCTCTTCTTTGTGATGAACTCGACGAGTTATTAGCGAGCGACGATGCTCTCAAGGA
AGAGAATCCCCCACGAGACCTGATGTACAGACTAGTACTATTGATGCATTTAGTAGAATG
CGATGGGACGGTTCTCTTAAAGTATGTCCCCAGAATTATTCCTGTACTGGATCGGGCACT
TAAAATTCAAACGTATTACGCATTGAATCGGGCCTCCGAAATCCTCGCCCACATGCTGAT
TTCGTTCAACTGCATTGAGCTGAAAGAATGGAAGAGTTCGACTAAGGATTACAGTGCAGC
GCCTCAAACGTGGCTGCCGGTCAGGGAGTGGGGCCACGGCTGCAAGCTCAAAGACCTTAG
TTTCAAATGGCACGTCCCCTGCAAGGAGGAGGCCGAATGCGCCCAAATGCTTTTGGACAG
ATACATGAAGCCCGAGATATCGAAGTTAAAGCAGTGGGTGAACGGTGACTGTGAAATGAG
TCGCGAGGAGAGATGCAGGTGTTTCTATGTTCTGGTGGCTGTGTTATCATGCGGGAATTT
CTTACCGCAACCCAACGAAGAGCCAGTGTTGTTATTGGAAACTCAAGTGCCGTCGACGAG
TATACCGTACACGAACGGAGTTAAGTTTTCTATAACACTGGACGGCGAGAACGTTCGCGT
CGCCGTCACGCGGCTATTAGTCCGAGTGCAGGAGCGGATGTTGGCCGACAAGTCGGACGA
CACGCGCGGCCTCGAGCTACTCACGAAGGTATGGGAACGTGTGGTGGTGATGAAGGGTTC
CAGAGTCGGTCCCAGTCTAGAAGAGCGTCTGATATCGTACGGCGCGCTGGACCGCGTGCT
GGACGGACGCGCAGGGCCCACCAATCGGTTCGGAGGCGCCGGGACCTCCAGACTGCGGAT
GTTGACGGCCGAAGCGGCGAGGATACACGATGAGTCGAGGGTGAACCTGGTGTGCGAGGC
GGGGATCACGCCCATAGCCTTAAAGGCGCTGCACGCATTGGCCGAGTTGTCCGTCAACAC
GTACACTTCTGTTCGAATGCTCTCCCAAATCAGACTGTACTGGATGCTCAATCATTATCC
TTACTCCTACCGCACTCTGGTGCCAAAGTTGGCTGAATTGTTGATCAAAGGCGGCGAAGG
CGACGAATGGCACGCCCGTCACAAAGGGACGTTATACATGATGCTCGGTCCGAGGAATGC
ACCGTTGATTGCTAAACAGGACTGGGAAGTGGCCAGAACGTTGTGGCCTGCCATACTGAA
GGCCCCCCTCAGCGAGAAACCAAGTATACTAAAGTTAGAACAAGCATTTGGGGACACGAT
ACACCGTAACTTCCCAGCAGTCAACACGCGTTTGGTGATACCGCAATCGGCAATAGATGC
GGCCGCCCGCCTCCTCACCGAGGAACAACTCAACGATGCCGAGTTTGTCGAAATGCTGAA
GAAGGCCAAACAAAACGAGACGGCGTTTTCCGATCGAAATGAGAGATTGTACAATGAATT
AATATTGGAACTGGTCGATTTAGCGGAGACGCCTAACATACCGTGGCGGCGGCTGGAGCT
GGCGTTCAACATGGCGGTGTACTGCCCGTCGCTGCAGACGGCGTACCCGGCGCGCGCGGT
GCGGCTGGCGGCGCGCGGGCTGCTGCACGACGACGTGGCGGTGCGCAGGTCGGCGCAGCG
GCTCGCGCACTACGCGCTCAAGCAGCGCAAGCGCCCGCTGCACAAGATACACGTCGACCC
GTACGAGCTGGCCGGACTGCCGCGCCCCGCACAGCACATACCCGGTTACAGAAAAGATGT
GGAGTGGGTCATGTGGTCTGAAGACAGGATACCAAAGAACGATGAAGAATGGGATAGACC
GTGGCTGAGAAGTCCTTCTTTTGGATTTTATCAGTGGCCCGAGAAATTGGTGGTAGCCGC
CCCGATAAGTCAACAGACGTGCTGTAAATTCCCTCCTCCTGAATGTATGGAGGAGGGCGA
ACGCTACCTTTTCGAGTTCTTCGATGACGACGAAAACGTTAACAAACTGGTCTCGTTCCT
GACCGTCGAGGAGAAAAAGGGCAAGGACAAGTTCAGCGGCGTTCGATTCTTGTTCTTCAA
GTTTCTGTTCGCTCATTACGGACCTCGTATAGCGGACAAGTTCACGGCGCACGCGCTGCG
GTGTGCGGCGGAGACGCGCGAGGCGCCGCAGCGGTTCGCGGCGGAGGTCGCGTCCGCCGC
GCTGCGGGCCGCGCGCTACTGGACCAGAGACGACGCTCTGAAGATGCACAGCGACACACT
AGAGATATTTAAAGCGGGTCTAACATCAGTGACTCCAGAGACGATGAATGATTGGGGCAC
GGCTTTGGCGACCGGTATGGAGAAGATGGATCCGCTGCGGGGCGCCACTGTGGTGCAGGG
GATCGTGGACCTCGCCATTCCGCCACCAGCGCCAGCTAATGCTGACCCTGATCAGAAGGC
ATCCTTCGTTGTGTGTGCCCGATTGCACGCATTACAGGGAGCCATCGGGTCACTGAAATG
GCGAACTGCACCGCTGTCCCAGATCCTGCTGAAGAAACTCGATGCTGCGAACTTTATACA
GCATCCTTACCAGAATGTGCGGGAAAGTGTCGGAAGTTTGCTAGCGACAATGTTCGACAC
GGAAGTGTTGTTCCCCGGCGGGCCGACTGGTTACTCCCTGTCTCTTGGCGACTTCATAGA
ATCGATTCAGCCAAGACTGGCCCCGTTATATGATGAGAATGGAGACATTGTAATATCCCT
GACGTCGACTACGTCACCCCTACAAGCGACGGCCGCCGAGGAGGCTCCGCAGTCGGCCGC
TTCCACGTCCAGAACTAGGAACTCGTTAAGCGGACAGATACCGGTGCGCGTCGCCAGACT
GTCGCCCGACTCCGCTGAAGCTTCCGTGAGCGAAGACGCAGCGCAGTCTGAAGCGGTTGA
AGGTGAAGAAGAATCGATAGGCCGTAGTCGTTTAGAGAAGCAGCTGGTGGATCGGCTCGA
CGCGGCCCTCAGTCTGTCCGGGGACGCGCCTGTCGTCGCGCCCCAACCCAAGGATCACGC
CCGGGCTCTGAGTCTACTCACTACCGTGATCCGCGCGAGCACGGGCGTGTGCGTGCGCGG
CGTGAGCGCGGGCGGCGTGGGCGGCGGCGTGGTGCGCGCGGCGTGTCGGTGCGCGGCGCG
CGG
(5403 bp)

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