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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR100805_c0_g1_i1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		Irregular_chiasm_C-roughest_protein_[Papilio_xuthus]
Ontology
GO:0001745 P compound eye morphogenesis
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007409 P axonogenesis
GO:0007520 P myoblast fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016202 P regulation of striated muscle tissue development
GO:0030165 F PDZ domain binding
GO:0042802 F identical protein binding
GO:0045177 C apical part of cell
GO:0046331 P lateral inhibition
GO:0046666 P retinal cell programmed cell death
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048749 P compound eye development
Transcript
Level		FPKM:13.59 TPM:18.10
ORF EntryO_BomoN4EE51269_5prime_partial:A_BomoN4EE_TR100805_c0_g1_i1
Sequence
(Nucleotide)
GCGACGCCATGTGGCACGATGTTTGGCGGAGTGAGAGCAATCATTTATATTGGAGTGAGT
CATAGATTTTATGAGGTCGGTCCATCGTGTTGGAGGTCGTCTGCGAGATCTTTTGCCCTC
GCAAATATGATAATTGATATAAATACAACTTCAACAAGTTACAATTTTAGTGTGAGTACA
GCGTACTTTAATCTTTTGAATATACGTATACAATATCCACATATATTGGAATATTTACGT
ATATATAATATATATATTTTTAGAGTATACAGTACACGCGTAAAACAAACGCTTGCTTAA
AATAAGGAACCAAACCAGTCTCTTTGAGTACGTTTTAATGTAATTAATTATATAAAACGA
AATGAGCTTTATGCTAAAATTACTTAGTGTCTACACGTGCGCGGCTAGATGGCTTCCATT
ACCTTTGGTTCCATGTTTGGTTTGTATCTTTCCCTGATTGGACGGCTGTAGGATATATTG
GGCTGAATTTTGTGAGCACGGCTTTGGCATCTGAGGCTGAGCTCCACTGTTTGTCGATGA
CGACGAAGCTGGAGGGCTGGTGACCGGTCGGGACGACGATGATGAAGGAGTCGTTACCGG
CGGAACTGACGGATGACACCCCTGACGTATTGTATAGTACGGTGGTGGAGTTGGTTTTCC
AGTCGATAGCGAAGCACTTTGAGAGCCGTATGGCGAAGATCCGCCACTTCTTAGATAAGG
ATTTCCATATGCAGCAGAGTACCTCACGTCAAGGCCTGACAGGACGACTCCGGGATTCGT
GAACGGTATCACATCAGGTCCGACGAGACCACCCAGTCTTCCACAGCTAGCTTGCCGCCT
TAAGGACCCATAATGACCAGGGTACGAAGACCCGTCAGTGCTTCTGGTCAGCGAACTGGA
CAGCGATTCCGATGGCACTGGCGGGGCGTAGTCCCTTGAGTAATCCACGTAGGGAACGTA
GCCGTTGCTTTGAGGGTGCGACTTAAAATGCAAACTGTTCACTTGCTGATTGAAGTCTCC
GCTGTATCTCTGGTACTTCATAAGCTCGTCGTCAAAGCCGGTCTCCGGTAGGGGAACCGG
CCCAGCTAGTGGCAATCCAAGGTTCGTTGTTATATGTAATGTAGGATGTAGATCTGCTTC
GGTGTTTGAGTGGTCCATATCACAGTTCCCTTCGATTTGTCTCAATTCCAATTTGAGATC
ACTTATGTTCGAATGCCGATCGCTCTCTTTATAGCTTCCACAGTTCTTCTCTATATCGGT
TATATGTGGTTTTTTTACATCAGCCTTTTTAGTTTTATTATGGAATAACATTATTACAAA
CATTATAATGAGGATAAATATTATAGCCGACGAACCTCCTATTAACGATATCAGCATTGG
GAATGTTTTTTCAGCTATTAAATGAATTTCGGCGCTATCCGTCCCATAGGAGTTTATAAC
CGTACAATTGTAGGGGCCAAAATGCTCCGATTCGCTCTTGCGGATAATCAAAGTGGACTT
CGTCATCTTGTCCGCTAAAGACTCTTCTAGAAAAGCGTATTCTTGGTTATGGAAACTGGT
TATCTCGTGGCCTCCAAAAGTCCACATCACGAAATCAGGTCTTGGTACTGAAAACGAGAT
ACATTCGATTCGGACTGTGTCTCCTTCGATCCCGTACTGAGTTAGATTTGACATAATCTT
CGGTGGACCTTTAATATAAACAACGGCTGGTGCTTCCACTTCTGGTCTTCCTTCGACCAC
GCCCCTGCACCAATAATGTCCGGCTGTCTGATGGGTTACCGTCACATTCAGGGTTTGTGT
TTTACCCACTCTAATGAACCGGTCGCCGTCATATCTGAGCCACATGATCTTTGGTGTTGG
GTGACCTTCTACAGCGCAATCCAATGTTACTGTGGACCCAGAGTCTGCTTCCACGCTCTG
CGGCTTCATTTTGAAGGTCGGTCCATAGATCACTTCTAAGGTTTTCGTATCGGCGCTATT
GCCAACCTTATTGTGCACTTCGCATTTGACAGACGCTTCGTTAAGCTTACGAGAAACGTT
TGTTATAATCAATTCATTTTTCACTTCTCCAATTGCTTCATCATTGTTTATGTACCATTT
GTAAGATACATTACTAGGGTTGGCATTCGATTGGCACCCTATTATTAATGTTTCCCCTTC
TTGTATTCTCCCTTTTATTGACCCGGATTTCATGAAGAGACGGACCTTAGGCGCGTATTG
GACTTGTAATTTGACGTTGACAGATCTATACGCCCTGTCTGCAGTGTTCTGCGCTTGGCA
AGTAAAAGTCTGATTGTGGTGTTGGCGTCTGGGACGTATTCTGAGGGTAGACCTCGCCGT
AAATCTTCTGCCATCACCCATCGGTTCCACGGTATAAGTGACACCTTGAGTCAAAACTCC
ACCGTCATTGTCGACCCACGTTATCTCCGCTGGAGGTTTTCCTCCTACTGAAACACACTC
CAAATCCAGCTCTCTGTCTTCTATAGCTGGAATGACGGGCCCCCGAAGTATCTTTGGAGG
ATCTGGTGGTACCAGCACCGTCAGTCGGGCGTACCTTGACCGAATTGCTGGCTCACCCCT
CGGTCCAGAGCTAACTTGGCATTGATATGCTGCGTCGTCATCCAGCGTAACTTCTCTGAT
GTCCAACGAGTAGTCGCCTTCTTCGTCGCTGCCAATCATTTTGTAGCGCTCGTATCCGGC
CAGATGGCGGTGTGTACCGAGTCCAAAGTCATCCTTAGTCCACTGAAGTTGCCCAGCCTT
CTCCTCAACTCTGCACGGAAGGATCACTCTGGAACCTAATATGGCGGTCTGATCTTGAGG
TTCTAGCGCGAACCGTTGCTCCCCAAACGCACTGACACTGGCACTGACACTAACAAAAAA
GATAAACAACATCCATTGCTTCACTAAAACTGACATAAAGCCCGATATCCTCAACAAAAG
GAACAATGTATTGCAGCATCTGCTCGTCAATCGTTTATTACACGCTTTCGTAATAAAACA
CATTTTGTTTATAGAATGTTCTAGATTACAATTTACGTCAAGTTTTGTTTGAATTTTGAA
ATCACCATCCGAATTTCCATTCGTCGTCCATCTTGAATATTCACAACACATTTTATTGCA
AATCTTCTCTACTCTGTCCTTTACCGAACAATAAAATCCAAAAAACAACACTAACACTCT
TATATATTTTTCGTATAATTAACTTAATAATCCGCGATGTTTTATTTTTCGTGAAATTGG
TTTTACAAAAGACACGTCTGCCGCGTACTAAGCCCG
(3276 bp)

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