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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
421 A_TrvaMG_comp11217_c0_seq1
327bp
PREDICTED:_remodeling_and_spacing_factor_1_isoform_X3_[Papilio_xuthus]
FPKM:3.72 TPM:3.13
422 A_TrvaMG_comp11218_c0_seq1
1039bp
PREDICTED:_uncharacterized_protein_LOC106130647_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0009838 P abscission
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032466 P negative regulation of cytokinesis
GO:0046872 F metal ion binding
GO:0051301 P cell division
FPKM:2.26 TPM:1.90
423 A_TrvaMG_comp11218_c0_seq2
555bp
PREDICTED:_uncharacterized_protein_LOC106130647_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0008289 F lipid binding
GO:0009838 P abscission
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032466 P negative regulation of cytokinesis
GO:0046872 F metal ion binding
GO:0051301 P cell division
FPKM:0.57 TPM:0.48
424 A_TrvaMG_comp11219_c0_seq1
1196bp
PREDICTED:_uncharacterized_protein_LOC101743969_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007281 P germ cell development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0035511 P oxidative DNA demethylation
GO:0035514 F DNA demethylase activity
GO:0035516 F oxidative DNA demethylase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:1901537 P positive regulation of DNA demethylation
FPKM:1.99 TPM:1.68
425 A_TrvaMG_comp112209_c0_seq1
697bp
PREDICTED:_DNL-type_zinc_finger_protein-like_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0008270 F zinc ion binding
GO:0030150 P protein import into mitochondrial matrix
GO:0046872 F metal ion binding
GO:0050821 P protein stabilization
GO:0051087 F chaperone binding
FPKM:7.48 TPM:6.29
426 A_TrvaMG_comp11220_c0_seq1
376bp
FPKM:1.52 TPM:1.28
427 A_TrvaMG_comp11221_c0_seq1
1853bp
PREDICTED:_WD_repeat-containing_and_planar_cell_polarity_effector_protein_fritz_homolog_isoform_X2_[Bombyx_mori]
GO:0001736 P establishment of planar polarity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0035320 P imaginal disc-derived wing hair site selection
GO:0042995 C cell projection
FPKM:2.17 TPM:1.83
428 A_TrvaMG_comp11221_c0_seq2
1168bp
PREDICTED:_WD_repeat-containing_and_planar_cell_polarity_effector_protein_fritz_homolog_isoform_X2_[Bombyx_mori]
GO:0001822 P kidney development
GO:0002093 P auditory receptor cell morphogenesis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0005938 C cell cortex
GO:0007224 P smoothened signaling pathway
GO:0007399 P nervous system development
GO:0010762 P regulation of fibroblast migration
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016476 P regulation of embryonic cell shape
GO:0030030 P cell projection organization
GO:0032185 P septin cytoskeleton organization
GO:0032880 P regulation of protein localization
GO:0042384 P cilium assembly
GO:0042733 P embryonic digit morphogenesis
GO:0042995 C cell projection
GO:0043010 P camera-type eye development
GO:0044782 P cilium organization
GO:0045184 P establishment of protein localization
GO:0048568 P embryonic organ development
GO:0051893 P regulation of focal adhesion assembly
GO:0055123 P digestive system development
GO:0060021 P roof of mouth development
GO:0060271 P cilium assembly
GO:0060541 P respiratory system development
GO:0072358 P circulatory system development
GO:0090521 P glomerular visceral epithelial cell migration
GO:0097541 C axonemal basal plate
GO:1900027 P regulation of ruffle assembly
GO:2000114 P regulation of establishment of cell polarity
FPKM:0.00 TPM:0.00
429 A_TrvaMG_comp11222_c0_seq1
2203bp
PREDICTED:_differentially_expressed_in_FDCP_8_homolog_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0008150 P biological_process
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
FPKM:1.73 TPM:1.45
430 A_TrvaMG_comp11223_c0_seq1
672bp
hypothetical_protein_KGM_02361_[Danaus_plexippus]
FPKM:2.77 TPM:2.33
431 A_TrvaMG_comp11224_c0_seq1
365bp
FPKM:2.16 TPM:1.82
432 A_TrvaMG_comp11224_c0_seq2
647bp
FPKM:0.81 TPM:0.68
433 A_TrvaMG_comp11225_c0_seq1
257bp
FPKM:2.67 TPM:2.25
434 A_TrvaMG_comp11226_c0_seq1
819bp
FPKM:1.73 TPM:1.45
435 A_TrvaMG_comp11227_c0_seq1
979bp
homocysteine_S-methyltransferase_[Bombyx_mori]
GO:0008168 F methyltransferase activity
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
FPKM:1.48 TPM:1.25
436 A_TrvaMG_comp11229_c0_seq1
549bp
PREDICTED:_uncharacterized_protein_LOC106123494_isoform_X1_[Papilio_xuthus]
FPKM:2.71 TPM:2.28
437 A_TrvaMG_comp112309_c0_seq1
704bp
PREDICTED:_troponin_C,_isoform_1-like_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0046872 F metal ion binding
FPKM:7.21 TPM:6.07
438 A_TrvaMG_comp11230_c0_seq1
815bp
FPKM:2.54 TPM:2.14
439 A_TrvaMG_comp11231_c0_seq1
695bp
FPKM:2.09 TPM:1.76
440 A_TrvaMG_comp11232_c0_seq1
3609bp
PREDICTED:_uncharacterized_protein_LOC101746166_[Bombyx_mori]
FPKM:1.83 TPM:1.54
441 A_TrvaMG_comp11233_c0_seq1
386bp
FPKM:1.85 TPM:1.55
442 A_TrvaMG_comp11234_c0_seq1
667bp
FPKM:2.38 TPM:2.00
443 A_TrvaMG_comp11235_c0_seq1
308bp
FPKM:3.98 TPM:3.35
444 A_TrvaMG_comp11237_c0_seq1
1390bp
PREDICTED:_LOW_QUALITY_PROTEIN:_sister_chromatid_cohesion_protein_DCC1_[Papilio_machaon]
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0007049 P cell cycle
GO:0031390 C Ctf18 RFC-like complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0034421 P post-translational protein acetylation
GO:0043142 F single-stranded DNA helicase activity
GO:1900264 P positive regulation of DNA-directed DNA polymerase activity
FPKM:2.34 TPM:1.97
445 A_TrvaMG_comp11238_c0_seq1
495bp
unknown_secreted_protein,_partial_[Papilio_polytes]
GO:0005576 C extracellular region
GO:0008289 F lipid binding
FPKM:3.05 TPM:2.56
446 A_TrvaMG_comp11241_c0_seq1
374bp
FPKM:2.92 TPM:2.46
447 A_TrvaMG_comp11242_c0_seq1
229bp
FPKM:3.23 TPM:2.72
448 A_TrvaMG_comp1124476_c0_seq1
265bp
PREDICTED:_collagen_alpha-3(VI)_chain_isoform_X3_[Elephantulus_edwardii]
FPKM:0.83 TPM:0.70
449 A_TrvaMG_comp11244_c0_seq1
433bp
PREDICTED:_uncharacterized_protein_LOC106143621_[Amyelois_transitella]
FPKM:4.16 TPM:3.50
450 A_TrvaMG_comp11245_c0_seq1
806bp
PREDICTED:_integrator_complex_subunit_1_[Papilio_machaon]
GO:0001832 P blastocyst growth
GO:0001833 P inner cell mass cell proliferation
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016180 P snRNA processing
GO:0031965 C nuclear membrane
GO:0032039 C integrator complex
GO:0034474 P U2 snRNA 3'-end processing
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
FPKM:2.76 TPM:2.32
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