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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1951 A_TrvaMG_comp12290_c0_seq1
365bp
FPKM:1.74 TPM:1.46
1952 A_TrvaMG_comp12291_c0_seq1
1711bp
PREDICTED:_suppressor_of_fused_homolog_[Papilio_machaon]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001501 P skeletal system development
GO:0001843 P neural tube closure
GO:0001947 P heart looping
GO:0003281 P ventricular septum development
GO:0003714 F transcription corepressor activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005929 C cilium
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0008013 F beta-catenin binding
GO:0008134 F transcription factor binding
GO:0019901 F protein kinase binding
GO:0021513 P spinal cord dorsal/ventral patterning
GO:0021775 P smoothened signaling pathway involved in ventral spinal cord interneuron specification
GO:0021776 P smoothened signaling pathway involved in spinal cord motor neuron cell fate specification
GO:0035904 P aorta development
GO:0042992 P obsolete negative regulation of transcription factor import into nucleus
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0043588 P skin development
GO:0045668 P negative regulation of osteoblast differentiation
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0060976 P coronary vasculature development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:0097546 C ciliary base
GO:1901621 P negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
FPKM:2.20 TPM:1.85
1953 A_TrvaMG_comp12291_c0_seq2
415bp
FPKM:1.00 TPM:0.85
1954 A_TrvaMG_comp12292_c0_seq1
616bp
FPKM:1.39 TPM:1.17
1955 A_TrvaMG_comp1229400_c0_seq1
230bp
Modifier_of_mdg4,_partial_[Operophtera_brumata]
FPKM:0.80 TPM:0.67
1956 A_TrvaMG_comp12294_c0_seq1
316bp
FPKM:0.95 TPM:0.80
1957 A_TrvaMG_comp122958_c0_seq1
247bp
FPKM:2.63 TPM:2.21
1958 A_TrvaMG_comp12296_c0_seq1
226bp
FPKM:2.10 TPM:1.77
1959 A_TrvaMG_comp12296_c1_seq1
520bp
PREDICTED:_uncharacterized_protein_LOC106135328_[Amyelois_transitella]
FPKM:1.17 TPM:0.98
1960 A_TrvaMG_comp1229864_c0_seq1
213bp
FPKM:1.51 TPM:1.27
1961 A_TrvaMG_comp12298_c0_seq1
395bp
odorant_receptor_94b_[Drosophila_simulans]
FPKM:1.27 TPM:1.07
1962 A_TrvaMG_comp12298_c1_seq1
332bp
hypothetical_protein_Y032_0126g1318_[Ancylostoma_ceylanicum]
FPKM:1.72 TPM:1.45
1963 A_TrvaMG_comp1229903_c0_seq1
202bp
PREDICTED:_uncharacterized_protein_LOC105393516_[Plutella_xylostella]
FPKM:1.81 TPM:1.53
1964 A_TrvaMG_comp12300_c0_seq1
225bp
hypothetical_protein_KGM_00074_[Danaus_plexippus]
FPKM:1.28 TPM:1.07
1965 A_TrvaMG_comp1230227_c0_seq1
205bp
YggU_family_protein_[Methanocaldococcus_infernus]
FPKM:1.72 TPM:1.45
1966 A_TrvaMG_comp1230290_c0_seq1
246bp
FPKM:0.66 TPM:0.56
1967 A_TrvaMG_comp12303_c0_seq1
211bp
FPKM:2.60 TPM:2.19
1968 A_TrvaMG_comp123054_c0_seq1
254bp
FPKM:0.61 TPM:0.51
1969 A_TrvaMG_comp12305_c0_seq1
411bp
FPKM:2.26 TPM:1.90
1970 A_TrvaMG_comp123062_c0_seq1
314bp
PREDICTED:_NADH-cytochrome_b5_reductase_2_isoform_X1_[Bombyx_mori]
FPKM:2.68 TPM:2.26
1971 A_TrvaMG_comp12306_c0_seq1
594bp
PREDICTED:_inverted_formin-2-like_[Bombyx_mori]
FPKM:1.53 TPM:1.29
1972 A_TrvaMG_comp12306_c1_seq1
286bp
FPKM:1.16 TPM:0.98
1973 A_TrvaMG_comp1230722_c0_seq1
212bp
hypothetical_protein_FD00_GL000812_[Lactobacillus_mali_KCTC_3596_=_DSM_20444]
FPKM:1.54 TPM:1.29
1974 A_TrvaMG_comp123079_c0_seq1
307bp
FPKM:6.60 TPM:5.56
1975 A_TrvaMG_comp12309_c0_seq1
296bp
PREDICTED:_uncharacterized_protein_LOC101741191_isoform_X1_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
FPKM:2.37 TPM:2.00
1976 A_TrvaMG_comp12310_c0_seq1
741bp
PREDICTED:_lysosome-associated_membrane_glycoprotein_1_[Bombyx_mori]
FPKM:2.29 TPM:1.93
1977 A_TrvaMG_comp12310_c1_seq1
236bp
PREDICTED:_lysosome-associated_membrane_glycoprotein_1_[Bombyx_mori]
FPKM:4.45 TPM:3.75
1978 A_TrvaMG_comp1231307_c0_seq1
227bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_33B-like,_partial_[Bombyx_mori]
FPKM:1.24 TPM:1.05
1979 A_TrvaMG_comp123137_c0_seq1
1384bp
PREDICTED:_nucleosome-remodeling_factor_subunit_NURF301_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016589 C NURF complex
GO:0016922 F nuclear receptor binding
GO:0019233 P sensory perception of pain
GO:0030097 P hemopoiesis
GO:0035064 F methylated histone binding
GO:0035073 P pupariation
GO:0035076 P ecdysone receptor-mediated signaling pathway
GO:0042766 P nucleosome mobilization
GO:0045747 P positive regulation of Notch signaling pathway
GO:0045824 P negative regulation of innate immune response
GO:0046331 P lateral inhibition
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046872 F metal ion binding
GO:0048515 P spermatid differentiation
GO:0048813 P dendrite morphogenesis
GO:0070577 F lysine-acetylated histone binding
GO:0070615 F ATP-dependent chromatin remodeler activity
FPKM:7.02 TPM:5.91
1980 A_TrvaMG_comp12313_c0_seq1
346bp
Dpy-19-like_protein_1,_partial_[Operophtera_brumata]
GO:0000030 F mannosyltransferase activity
GO:0003824 F catalytic activity
GO:0005637 C nuclear inner membrane
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005975 P carbohydrate metabolic process
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018406 P protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan
GO:0030154 P cell differentiation
GO:0048471 C perinuclear region of cytoplasm
FPKM:2.07 TPM:1.74
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