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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp12291_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_suppressor_of_fused_homolog_[Papilio_machaon]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001501 P skeletal system development
GO:0001843 P neural tube closure
GO:0001947 P heart looping
GO:0003281 P ventricular septum development
GO:0003714 F transcription corepressor activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005929 C cilium
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0008013 F beta-catenin binding
GO:0008134 F transcription factor binding
GO:0019901 F protein kinase binding
GO:0021513 P spinal cord dorsal/ventral patterning
GO:0021775 P smoothened signaling pathway involved in ventral spinal cord interneuron specification
GO:0021776 P smoothened signaling pathway involved in spinal cord motor neuron cell fate specification
GO:0035904 P aorta development
GO:0042992 P obsolete negative regulation of transcription factor import into nucleus
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0043588 P skin development
GO:0045668 P negative regulation of osteoblast differentiation
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0060976 P coronary vasculature development
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:0097546 C ciliary base
GO:1901621 P negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:2000059 P negative regulation of ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:2.20 TPM:1.85
ORF EntryO_TrvaMG662_complete:A_TrvaMG_comp12291_c0_seq1
Sequence
(Nucleotide)
GGAAAATTAAAAAAAACAGACAACAGCTGAAAAAAGTTTTTGTGAATATTTGTTGAAAAT
TACACTTTATTAACGAAATTTAATAATAAAATCAGTGATGGCCGATCCTAGTGGATCTGG
GGCTCCTTCCGGGGTACCCTGTAACAGTGCTCTATCATTCGTTGCGTCTGCGCAGCGAGT
CCAACCCGAAACACAGGATGTCAACCAAAATGAACAACTAATCCCGGAAGCCCCGGCAGG
TGTGAAGGCGCTGTGCGAGGCGTGCACCCAGCTCTACCCGGACCAACCCAACCCATTACA
AGTCACTACCCGACTCAAATATTGGCTGGGAGGTCAGGATCCTCTCGATTATATCAGCAT
GTACCGGAACCCAGGGAGGCCGGAGGAGAATATTCCACCACACTGGCATTATATCAGTTT
CGGTCTATCAGACCTACACGGTGACGGCAGGGTGCACGCGCCCCGCTCAGCGGAGCCCCA
CTCTCCCTCGGGCTTCGGTCTCGAGATCACGTTCAGGCTGTCTTCAGACGAGCCCCAGCC
TCCGTTGTGGCCGGCTGCGTTATTACAAGCGCTGGCTAGATATATTTTTACTACGGGTAA
CAAGTTATGCGCCGGCGATCACATATCGTGGCATCGTCCACTAGACGGTGTTACGTCCCG
CGGCCGCATGCGACACTTGCTAGTGGCGGCCGAACCGCAGCTGCGGCTGATACGGACCGC
ACACGGAACGGTTACTTTTTTACAGATAGTAGGATGTACAAATAGAGAATTAAAAGCAGC
ACAAAGGAGCTCAGTGTTTGATGTATTGAAATTAATTGCACAAGATCCCAAGTGCGGCGG
TTCCTGGTTCGTTACCAGAATGGACAGACGGATATCCGTCAAATTAGACACGGGGAATGT
AAAGACCTTAGCACAATTAGCCGGAGTGTCAAGTGATGTGCGCTGGTACTTATGGAGCGA
TCATGACAGAACTAATAATAAAACGAGTATAAATTCAGTTGAAGATCAAATAAAAGAAAC
GTTACAGCGGGGACTTAACGATTCACGAGGTGGAGTAGCAGGTCACATGTCAACAGATAG
TTTTGAAATGTCTAGTATGGAAAAAGCGTTACCCAAGTTATCAACAGAGAGTTCATGGCG
TGAAGACACCGTGGAATATCTAGAAGGGGTGCATTTAATAATGAACGCGGAGGGAGCGAG
TCTACTACCCCTAGCTATAGAAGGTCGCATCCTCCACGGAGCCCACTTCACGTGGCGAGG
AGATCTGACGGCGGTGACGTTGGTCGCGTCAGATGTCGTCGGATCGTACGTGAGCGCGGA
CAAGCCTTACGCTACCAAAGGAAGCTGGCTGCAGATATTAATATCCAAAGAACTAGCGAC
AGAGATACTATCTCATCGTTCAGTGCTGAACAGCATAGGGTGCGGTGTCTCTGATAGCGA
GGACGAATCCTCCTCAACTAGCGCCACTCTACCGCTCACTATGTGCTGGCGGAAACACGC
GCTAGCGATCACTGTGTGCGCTTAAAATAAAAAACATGGGGTTGAAAAGGCCTCGTAAAA
TTTTGATAGGGTCGAAAAGACCTCGTACTTGGAAAGGCGTTAAAATATGTAAAAATACCA
ATAAATGTTATTTTTGTAATATTAATAAAGTAATTTAAAAATGACCTTTGTTTTATTTCG
TGTTTCGAATAATAGGCATAGACACTTGTTG
(1711 bp)

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