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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1801 A_TrvaMG_comp12182_c0_seq1
210bp
Putative_uncharacterized_protein,_partial_[Pararhodospirillum_photometricum_DSM_122]
FPKM:4.23 TPM:3.56
1802 A_TrvaMG_comp12183_c0_seq1
537bp
PREDICTED:_anaphase-promoting_complex_subunit_5_isoform_X2_[Bombyx_mori]
FPKM:1.51 TPM:1.28
1803 A_TrvaMG_comp12184_c0_seq1
795bp
PREDICTED:_juxtaposed_with_another_zinc_finger_protein_1_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003714 F transcription corepressor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006629 P lipid metabolic process
GO:0017053 C transcription repressor complex
GO:0046872 F metal ion binding
FPKM:1.38 TPM:1.16
1804 A_TrvaMG_comp1218513_c0_seq1
255bp
CDP-diacylglycerol--glycerol-3-phosphate_3-phosphatidyltransferase_[Bacillus_sp._1NLA3E]
FPKM:1.21 TPM:1.02
1805 A_TrvaMG_comp1218536_c0_seq1
324bp
hypothetical_protein_[Desulforegula_conservatrix]
FPKM:0.72 TPM:0.61
1806 A_TrvaMG_comp12185_c0_seq1
330bp
hypothetical_protein_HMPREF3230_00157_[Gardnerella_vaginalis]
FPKM:1.74 TPM:1.46
1807 A_TrvaMG_comp1218752_c0_seq1
212bp
PREDICTED:_uncharacterized_protein_LOC106714287_[Papilio_machaon]
FPKM:1.54 TPM:1.29
1808 A_TrvaMG_comp12187_c0_seq1
806bp
SSU_ribosomal_protein_S4E_[Enterocytozoon_bieneusi_H348]
GO:0003723 F RNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
FPKM:1.83 TPM:1.54
1809 A_TrvaMG_comp12188_c0_seq1
203bp
FPKM:3.57 TPM:3.00
1810 A_TrvaMG_comp12189_c0_seq1
447bp
sorbitol_dehydrogenase_[Bombyx_mori]
GO:0003939 F L-iditol 2-dehydrogenase activity
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.77 TPM:1.49
1811 A_TrvaMG_comp1218_c0_seq1
256bp
Noki_protein_[Bombyx_mori]
FPKM:0.90 TPM:0.76
1812 A_TrvaMG_comp1219032_c0_seq1
266bp
PREDICTED:_zinc_finger_protein_845-like_isoform_X3_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:0.82 TPM:0.69
1813 A_TrvaMG_comp1219060_c0_seq1
232bp
FPKM:0.78 TPM:0.66
1814 A_TrvaMG_comp1219070_c0_seq1
212bp
FPKM:1.54 TPM:1.29
1815 A_TrvaMG_comp12190_c0_seq1
881bp
PREDICTED:_uncharacterized_protein_LOC106718049_[Papilio_machaon]
FPKM:1.30 TPM:1.10
1816 A_TrvaMG_comp1219274_c0_seq1
245bp
PREDICTED:_interference_hedgehog-like_[Papilio_machaon]
FPKM:1.01 TPM:0.85
1817 A_TrvaMG_comp12192_c0_seq1
335bp
FPKM:1.86 TPM:1.57
1818 A_TrvaMG_comp12192_c1_seq1
256bp
FPKM:2.40 TPM:2.02
1819 A_TrvaMG_comp12193_c0_seq1
281bp
FPKM:2.89 TPM:2.44
1820 A_TrvaMG_comp12193_c1_seq1
428bp
FPKM:0.89 TPM:0.75
1821 A_TrvaMG_comp12194_c0_seq1
259bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.87 TPM:0.74
1822 A_TrvaMG_comp1219527_c0_seq1
204bp
PREDICTED:_tripartite_motif-containing_protein_2-like_isoform_X2_[Bombyx_mori]
FPKM:1.75 TPM:1.47
1823 A_TrvaMG_comp12195_c0_seq1
596bp
PREDICTED:_calmodulin-binding_transcription_activator_2_[Bombyx_mori]
FPKM:1.86 TPM:1.57
1824 A_TrvaMG_comp12196_c0_seq1
369bp
FPKM:1.85 TPM:1.56
1825 A_TrvaMG_comp121970_c0_seq1
1103bp
PREDICTED:_proteasome_inhibitor_PI31_subunit_[Papilio_polytes]
GO:0000502 C proteasome complex
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006974 P cellular response to DNA damage stimulus
GO:0007140 P male meiotic nuclear division
GO:0007275 P multicellular organism development
GO:0008584 P male gonad development
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043248 P proteasome assembly
GO:0070864 C sperm individualization complex
FPKM:6.91 TPM:5.82
1826 A_TrvaMG_comp12197_c0_seq1
662bp
PREDICTED:_zinc_finger_BED_domain-containing_protein_1-like_[Amyelois_transitella]
GO:0000228 C nuclear chromosome
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004803 F transposase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0015629 C actin cytoskeleton
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
FPKM:1.38 TPM:1.16
1827 A_TrvaMG_comp122007_c0_seq1
3924bp
PREDICTED:_mitogen-activated_protein_kinase_kinase_kinase_kinase_5_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000185 P obsolete activation of MAPKKK activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007254 P JNK cascade
GO:0008349 F MAP kinase kinase kinase kinase activity
GO:0009411 P response to UV
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0034612 P response to tumor necrosis factor
GO:0035556 P intracellular signal transduction
FPKM:4.94 TPM:4.16
1828 A_TrvaMG_comp12200_c0_seq1
376bp
FPKM:1.24 TPM:1.04
1829 A_TrvaMG_comp1220137_c0_seq1
249bp
FPKM:1.29 TPM:1.08
1830 A_TrvaMG_comp12201_c0_seq1
233bp
FancJ-like_protein_[Bombyx_mori]
FPKM:2.22 TPM:1.87
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