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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1711 A_TrvaMG_comp1212288_c0_seq1
252bp
FPKM:0.94 TPM:0.79
1712 A_TrvaMG_comp1212362_c0_seq1
284bp
hypothetical_protein_EBI_25719_[Enterocytozoon_bieneusi_H348]
FPKM:0.71 TPM:0.59
1713 A_TrvaMG_comp1212383_c0_seq1
262bp
PREDICTED:_disks_large_homolog_5_isoform_X1_[Bombyx_mori]
FPKM:0.85 TPM:0.72
1714 A_TrvaMG_comp12123_c0_seq1
583bp
PREDICTED:_mismatch_repair_endonuclease_PMS2_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0015630 C microtubule cytoskeleton
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032138 F single base insertion or deletion binding
GO:0032300 C mismatch repair complex
GO:0032389 C MutLalpha complex
GO:0032407 F MutSalpha complex binding
GO:0042493 P response to xenobiotic stimulus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.92 TPM:1.62
1715 A_TrvaMG_comp121247_c0_seq1
1367bp
PREDICTED:_uncharacterized_protein_LOC101738114_isoform_X2_[Bombyx_mori]
FPKM:5.88 TPM:4.95
1716 A_TrvaMG_comp1212595_c0_seq1
220bp
FPKM:1.37 TPM:1.15
1717 A_TrvaMG_comp12125_c0_seq1
241bp
FPKM:2.45 TPM:2.06
1718 A_TrvaMG_comp1212733_c0_seq1
210bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_K02A2.6-like,_partial_[Esox_lucius]
FPKM:1.06 TPM:0.89
1719 A_TrvaMG_comp12127_c0_seq1
350bp
cGMP-dependent_protein_kinase,_isozyme_2_forms_cD4/T1/T3A/T3B_[Papilio_machaon]
FPKM:2.19 TPM:1.84
1720 A_TrvaMG_comp1212813_c0_seq1
220bp
FPKM:0.46 TPM:0.38
1721 A_TrvaMG_comp1212833_c0_seq1
213bp
FPKM:1.51 TPM:1.27
1722 A_TrvaMG_comp121295_c0_seq1
1611bp
PREDICTED:_uncharacterized_protein_LOC106713881_isoform_X1_[Papilio_machaon]
GO:0001919 P regulation of receptor recycling
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0007032 P endosome organization
GO:0007040 P lysosome organization
GO:0010872 P regulation of cholesterol esterification
GO:0010874 P regulation of cholesterol efflux
GO:0016020 C membrane
GO:0016049 P cell growth
GO:0031902 C late endosome membrane
GO:0032008 P positive regulation of TOR signaling
GO:0032418 P lysosome localization
GO:0032439 P endosomal transport
GO:0032947 F molecular adaptor activity
GO:0034613 P cellular protein localization
GO:0042632 P cholesterol homeostasis
GO:0043410 P positive regulation of MAPK cascade
GO:0043547 P positive regulation of GTPase activity
GO:0045121 C membrane raft
GO:0060620 P regulation of cholesterol import
GO:0071230 P cellular response to amino acid stimulus
GO:0071986 C Ragulator complex
FPKM:6.38 TPM:5.37
1723 A_TrvaMG_comp121304_c0_seq1
770bp
FPKM:5.60 TPM:4.71
1724 A_TrvaMG_comp12130_c0_seq1
264bp
PREDICTED:_uncharacterized_protein_LOC106137966_[Amyelois_transitella]
FPKM:1.95 TPM:1.64
1725 A_TrvaMG_comp1213191_c0_seq1
202bp
PREDICTED:_microvitellogenin-like,_partial_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:1.21 TPM:1.02
1726 A_TrvaMG_comp12131_c0_seq1
374bp
FPKM:1.39 TPM:1.17
1727 A_TrvaMG_comp1213227_c0_seq1
217bp
T-complex_protein_1,_zeta_subunit_[Enterocytozoon_bieneusi_H348]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005832 C chaperonin-containing T-complex
GO:0005856 C cytoskeleton
GO:0006457 P protein folding
GO:0007021 P tubulin complex assembly
GO:0051082 F unfolded protein binding
FPKM:1.43 TPM:1.20
1728 A_TrvaMG_comp12132_c0_seq1
232bp
FPKM:1.17 TPM:0.98
1729 A_TrvaMG_comp12133_c0_seq1
316bp
PREDICTED:_ABC_transporter_B_family_member_28_[Amborella_trichopoda]
FPKM:2.01 TPM:1.69
1730 A_TrvaMG_comp1213426_c0_seq1
214bp
FPKM:1.49 TPM:1.26
1731 A_TrvaMG_comp12135_c0_seq1
320bp
FPKM:1.11 TPM:0.93
1732 A_TrvaMG_comp1213652_c0_seq1
205bp
PREDICTED:_putative_ammonium_transporter_3_[Papilio_polytes]
FPKM:0.57 TPM:0.48
1733 A_TrvaMG_comp12136_c0_seq1
373bp
PREDICTED:_DNA_helicase_MCM8-like_isoform_X2_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007292 P female gamete generation
GO:0016787 F hydrolase activity
GO:0048232 P male gamete generation
GO:0097362 C MCM8-MCM9 complex
FPKM:2.10 TPM:1.76
1734 A_TrvaMG_comp1213759_c0_seq1
280bp
PDZ_domain-containing_protein_2_[Operophtera_brumata]
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005911 C cell-cell junction
GO:0007155 P cell adhesion
FPKM:0.97 TPM:0.82
1735 A_TrvaMG_comp1213794_c0_seq1
211bp
FPKM:1.56 TPM:1.31
1736 A_TrvaMG_comp1213812_c0_seq1
218bp
FPKM:1.41 TPM:1.18
1737 A_TrvaMG_comp12138_c0_seq1
542bp
PREDICTED:_RNA_binding_protein_fox-1_homolog_2,_partial_[Plutella_xylostella]
FPKM:1.34 TPM:1.13
1738 A_TrvaMG_comp12140_c0_seq1
757bp
hypothetical_protein_KGM_06737_[Danaus_plexippus]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001105 F transcription coactivator activity
GO:0001708 P cell fate specification
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0008134 F transcription factor binding
GO:0008284 P positive regulation of cell population proliferation
GO:0008340 P determination of adult lifespan
GO:0021983 P pituitary gland development
GO:0021984 P adenohypophysis development
GO:0030183 P B cell differentiation
GO:0032962 P positive regulation of inositol trisphosphate biosynthetic process
GO:0040018 P positive regulation of multicellular organism growth
GO:0043565 F sequence-specific DNA binding
GO:0043567 P regulation of insulin-like growth factor receptor signaling pathway
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051169 P nuclear transport
GO:0060126 P somatotropin secreting cell differentiation
GO:0060133 P somatotropin secreting cell development
FPKM:1.82 TPM:1.53
1739 A_TrvaMG_comp12141_c0_seq1
392bp
PREDICTED:_protein_Jumonji_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016568 P chromatin organization
GO:0030154 P cell differentiation
GO:0031061 P negative regulation of histone methylation
GO:0032452 F histone demethylase activity
GO:0035097 C histone methyltransferase complex
GO:0035098 C ESC/E(Z) complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048863 P stem cell differentiation
GO:0051574 P positive regulation of histone H3-K9 methylation
FPKM:1.93 TPM:1.62
1740 A_TrvaMG_comp121423_c0_seq1
531bp
FPKM:7.61 TPM:6.41
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