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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1621 A_TrvaMG_comp12067_c1_seq1
544bp
PREDICTED:_elongation_factor_Tu_GTP-binding_domain-containing_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0006412 P translation
GO:0008152 P metabolic process
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0043022 F ribosome binding
FPKM:2.66 TPM:2.24
1622 A_TrvaMG_comp12068_c0_seq1
1636bp
PREDICTED:_N-alpha-acetyltransferase_60_[Bombyx_mori]
GO:0004402 F histone acetyltransferase activity
GO:0004596 F peptide alpha-N-acetyltransferase activity
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0007059 P chromosome segregation
GO:0008080 F N-acetyltransferase activity
GO:0010485 F H4 histone acetyltransferase activity
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0017196 P N-terminal peptidyl-methionine acetylation
GO:0043967 P histone H4 acetylation
FPKM:1.97 TPM:1.66
1623 A_TrvaMG_comp12068_c1_seq1
822bp
FPKM:1.69 TPM:1.42
1624 A_TrvaMG_comp12069_c0_seq1
942bp
PREDICTED:_BAH_and_coiled-coil_domain-containing_protein_1_isoform_X1_[Amyelois_transitella]
GO:0000785 C chromatin
GO:0000976 F transcription cis-regulatory region binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005677 C chromatin silencing complex
GO:0005694 C chromosome
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0007560 P imaginal disc morphogenesis
GO:0030154 P cell differentiation
GO:0031507 P heterochromatin assembly
FPKM:1.07 TPM:0.90
1625 A_TrvaMG_comp12069_c0_seq2
1025bp
PREDICTED:_BAH_and_coiled-coil_domain-containing_protein_1_isoform_X3_[Amyelois_transitella]
GO:0000785 C chromatin
GO:0000976 F transcription cis-regulatory region binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005677 C chromatin silencing complex
GO:0005694 C chromosome
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0007560 P imaginal disc morphogenesis
GO:0030154 P cell differentiation
GO:0031507 P heterochromatin assembly
FPKM:0.46 TPM:0.39
1626 A_TrvaMG_comp12070_c0_seq1
544bp
PREDICTED:_zinc_finger_protein_62_homolog_isoform_X2_[Amyelois_transitella]
FPKM:1.96 TPM:1.65
1627 A_TrvaMG_comp12070_c1_seq1
1180bp
PREDICTED:_zinc_finger_protein_91-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006359 P regulation of transcription by RNA polymerase III
GO:0006366 P transcription by RNA polymerase II
GO:0006383 P transcription by RNA polymerase III
GO:0046872 F metal ion binding
FPKM:2.20 TPM:1.85
1628 A_TrvaMG_comp1207172_c0_seq1
235bp
hypothetical_protein_RR48_12638_[Papilio_machaon]
FPKM:1.13 TPM:0.95
1629 A_TrvaMG_comp12071_c0_seq1
229bp
FPKM:3.23 TPM:2.72
1630 A_TrvaMG_comp1207315_c0_seq1
283bp
PREDICTED:_uncharacterized_protein_LOC106718466_isoform_X1_[Papilio_machaon]
FPKM:0.95 TPM:0.80
1631 A_TrvaMG_comp12073_c0_seq1
262bp
FPKM:3.40 TPM:2.86
1632 A_TrvaMG_comp1207454_c0_seq1
203bp
FPKM:1.19 TPM:1.00
1633 A_TrvaMG_comp120753_c0_seq1
852bp
FPKM:8.61 TPM:7.25
1634 A_TrvaMG_comp12076_c0_seq1
792bp
FPKM:1.34 TPM:1.13
1635 A_TrvaMG_comp120773_c0_seq1
1339bp
PREDICTED:_protein_REVERSION-TO-ETHYLENE_SENSITIVITY1_[Amyelois_transitella]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:5.66 TPM:4.77
1636 A_TrvaMG_comp12077_c0_seq1
305bp
FPKM:3.65 TPM:3.07
1637 A_TrvaMG_comp12079_c0_seq1
678bp
similar_to_CG10263-PA,_partial_[Papilio_xuthus]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0007162 P negative regulation of cell adhesion
GO:0008270 F zinc ion binding
GO:0016337 P cell-cell adhesion
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0030155 P regulation of cell adhesion
GO:0030335 P positive regulation of cell migration
GO:0042802 F identical protein binding
GO:0045807 P positive regulation of endocytosis
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
FPKM:1.05 TPM:0.88
1638 A_TrvaMG_comp1208001_c0_seq1
255bp
dna_replication_licensing_factor_mcm4_[Nosema_ceranae]
GO:0000166 F nucleotide binding
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003697 F single-stranded DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
GO:0006268 P DNA unwinding involved in DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0042555 C MCM complex
FPKM:0.91 TPM:0.76
1639 A_TrvaMG_comp120804_c0_seq1
212bp
FPKM:3.59 TPM:3.02
1640 A_TrvaMG_comp12081_c0_seq1
426bp
PREDICTED:_zinc_finger_protein_729_[Bombyx_mori]
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0009649 P entrainment of circadian clock
GO:0010114 P response to red light
GO:0035271 P ring gland development
GO:0042051 P compound eye photoreceptor development
GO:0043153 P entrainment of circadian clock by photoperiod
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
GO:0060086 P circadian temperature homeostasis
FPKM:1.91 TPM:1.61
1641 A_TrvaMG_comp12081_c1_seq1
574bp
PREDICTED:_zinc_finger_protein_729_[Bombyx_mori]
FPKM:1.74 TPM:1.47
1642 A_TrvaMG_comp120821_c0_seq1
576bp
FPKM:4.56 TPM:3.84
1643 A_TrvaMG_comp12082_c0_seq1
1110bp
FPKM:2.42 TPM:2.04
1644 A_TrvaMG_comp12082_c1_seq1
616bp
FPKM:2.18 TPM:1.84
1645 A_TrvaMG_comp12083_c0_seq1
436bp
FPKM:1.84 TPM:1.55
1646 A_TrvaMG_comp1208424_c0_seq1
287bp
subunit_eta_of_T-complex_protein_1_[Ordospora_colligata_OC4]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005832 C chaperonin-containing T-complex
GO:0006457 P protein folding
GO:0051082 F unfolded protein binding
FPKM:0.92 TPM:0.78
1647 A_TrvaMG_comp12084_c0_seq1
2366bp
PREDICTED:_titin-like_[Plutella_xylostella]
FPKM:2.03 TPM:1.71
1648 A_TrvaMG_comp12084_c1_seq1
228bp
Muscle-specific_protein_[Operophtera_brumata]
FPKM:3.27 TPM:2.76
1649 A_TrvaMG_comp12085_c0_seq1
419bp
cuticular_protein_44-aa_motif_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
FPKM:0.92 TPM:0.78
1650 A_TrvaMG_comp12085_c0_seq2
247bp
cuticular_protein_44-aa_motif_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
FPKM:3.29 TPM:2.77
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