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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1591 A_TrvaMG_comp12052_c0_seq1
232bp
hypothetical_protein_ASPNIDRAFT_144168_[Aspergillus_niger_ATCC_1015]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0043457 P regulation of cellular respiration
FPKM:2.72 TPM:2.29
1592 A_TrvaMG_comp1205395_c0_seq1
230bp
FPKM:1.20 TPM:1.01
1593 A_TrvaMG_comp1205459_c0_seq1
201bp
FPKM:1.85 TPM:1.55
1594 A_TrvaMG_comp1205470_c0_seq1
237bp
PREDICTED:_zinc_finger_protein_454-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.10 TPM:0.93
1595 A_TrvaMG_comp12055_c0_seq1
334bp
FPKM:1.36 TPM:1.15
1596 A_TrvaMG_comp1205614_c0_seq1
218bp
FPKM:1.41 TPM:1.18
1597 A_TrvaMG_comp1205631_c0_seq1
391bp
PREDICTED:_uncharacterized_protein_LOC106141557,_partial_[Amyelois_transitella]
FPKM:0.77 TPM:0.65
1598 A_TrvaMG_comp1205657_c0_seq1
212bp
FPKM:1.54 TPM:1.29
1599 A_TrvaMG_comp1205682_c0_seq1
390bp
putative_cell_cycle-associated_protein_[Operophtera_brumata]
FPKM:0.78 TPM:0.65
1600 A_TrvaMG_comp12056_c0_seq1
404bp
Cell_shape-determining_protein_MreC_[Candidatus_Moranbacteria_bacterium_GW2011_GWA2_39_41]
FPKM:1.96 TPM:1.65
1601 A_TrvaMG_comp1205718_c0_seq1
213bp
PREDICTED:_uncharacterized_protein_LOC101739289_[Bombyx_mori]
FPKM:1.51 TPM:1.27
1602 A_TrvaMG_comp1205768_c0_seq1
281bp
PREDICTED:_uncharacterized_protein_LOC105842686_[Bombyx_mori]
FPKM:0.72 TPM:0.61
1603 A_TrvaMG_comp12058_c0_seq1
562bp
PREDICTED:_loss_of_heterozygosity_12_chromosomal_region_1_protein_homolog_[Papilio_polytes]
FPKM:2.10 TPM:1.76
1604 A_TrvaMG_comp12058_c1_seq1
206bp
PREDICTED:_loss_of_heterozygosity_12_chromosomal_region_1_protein_homolog_[Amyelois_transitella]
FPKM:4.52 TPM:3.80
1605 A_TrvaMG_comp1205924_c0_seq1
265bp
FPKM:0.83 TPM:0.70
1606 A_TrvaMG_comp1205973_c0_seq1
215bp
FPKM:1.47 TPM:1.24
1607 A_TrvaMG_comp12059_c0_seq1
1013bp
PREDICTED:_coiled-coil_domain-containing_protein_186_isoform_X1_[Bombyx_mori]
FPKM:1.46 TPM:1.23
1608 A_TrvaMG_comp12060_c0_seq1
230bp
PREDICTED:_cryptochrome-1_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0009881 F photoreceptor activity
GO:0018298 P protein-chromophore linkage
GO:0042622 C photoreceptor outer segment membrane
GO:0048511 P rhythmic process
GO:0050896 P response to stimulus
GO:0097381 C photoreceptor disc membrane
FPKM:4.39 TPM:3.69
1609 A_TrvaMG_comp12061_c0_seq1
247bp
FPKM:1.64 TPM:1.38
1610 A_TrvaMG_comp1206204_c0_seq1
239bp
PREDICTED:_cytoplasmic_dynein_2_heavy_chain_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0030030 P cell projection organization
GO:0030286 C dynein complex
GO:0042995 C cell projection
GO:0051959 F dynein light intermediate chain binding
FPKM:0.72 TPM:0.60
1611 A_TrvaMG_comp12062_c0_seq1
402bp
reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.85 TPM:1.56
1612 A_TrvaMG_comp1206315_c0_seq1
205bp
PREDICTED:_uncharacterized_protein_LOC105842744,_partial_[Bombyx_mori]
FPKM:2.30 TPM:1.93
1613 A_TrvaMG_comp1206384_c0_seq1
246bp
conserved_hypothetical_protein_[Desulfobacterium_autotrophicum_HRM2]
FPKM:1.00 TPM:0.84
1614 A_TrvaMG_comp12064_c0_seq1
226bp
FPKM:0.84 TPM:0.71
1615 A_TrvaMG_comp12065_c0_seq1
297bp
FPKM:1.71 TPM:1.44
1616 A_TrvaMG_comp12065_c1_seq1
2460bp
PREDICTED:_oxysterol-binding_protein-related_protein_9_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0031902 C late endosome membrane
FPKM:3.11 TPM:2.62
1617 A_TrvaMG_comp1206638_c0_seq1
229bp
mPB-L3-ERT2_[synthetic_construct]
FPKM:0.81 TPM:0.68
1618 A_TrvaMG_comp1206665_c0_seq1
284bp
FPKM:0.71 TPM:0.59
1619 A_TrvaMG_comp12066_c0_seq1
320bp
PREDICTED:_leucine-rich_repeats_and_immunoglobulin-like_domains_protein_1_[Eptesicus_fuscus]
FPKM:2.58 TPM:2.17
1620 A_TrvaMG_comp12067_c0_seq1
442bp
PREDICTED:_elongation_factor_Tu_GTP-binding_domain-containing_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0006412 P translation
GO:0008152 P metabolic process
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0043022 F ribosome binding
FPKM:2.55 TPM:2.14
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