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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1441 A_TrvaMG_comp11947_c1_seq1
339bp
FPKM:0.66 TPM:0.56
1442 A_TrvaMG_comp1194823_c0_seq1
204bp
FPKM:1.75 TPM:1.47
1443 A_TrvaMG_comp11948_c0_seq1
337bp
FPKM:1.84 TPM:1.55
1444 A_TrvaMG_comp1194920_c0_seq1
201bp
PREDICTED:_uncharacterized_protein_LOC101741191_isoform_X1_[Bombyx_mori]
FPKM:1.23 TPM:1.04
1445 A_TrvaMG_comp11949_c0_seq1
762bp
Dedicator_of_cytokinesis_protein_4_[Papilio_xuthus]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007264 P small GTPase mediated signal transduction
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0030165 F PDZ domain binding
GO:0030971 F receptor tyrosine kinase binding
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0042995 C cell projection
GO:0043547 P positive regulation of GTPase activity
GO:0048365 F small GTPase binding
GO:0060326 P cell chemotaxis
GO:1904694 P negative regulation of vascular associated smooth muscle contraction
GO:1904754 P positive regulation of vascular associated smooth muscle cell migration
FPKM:1.91 TPM:1.61
1446 A_TrvaMG_comp11950_c0_seq1
667bp
beta-hexosaminidase_[Ostrinia_furnacalis]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005764 C lysosome
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:1.55 TPM:1.30
1447 A_TrvaMG_comp11951_c0_seq1
782bp
PREDICTED:_peptidyl-alpha-hydroxyglycine_alpha-amidating_lyase_1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004598 F peptidylamidoglycolate lyase activity
GO:0005886 C plasma membrane
GO:0006518 P peptide metabolic process
GO:0007619 P courtship behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0043025 C neuronal cell body
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0046872 F metal ion binding
FPKM:2.09 TPM:1.76
1448 A_TrvaMG_comp11951_c1_seq1
324bp
PREDICTED:_peptidyl-alpha-hydroxyglycine_alpha-amidating_lyase_1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004598 F peptidylamidoglycolate lyase activity
GO:0005886 C plasma membrane
GO:0006518 P peptide metabolic process
GO:0007619 P courtship behavior
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0043025 C neuronal cell body
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0046872 F metal ion binding
FPKM:2.16 TPM:1.82
1449 A_TrvaMG_comp11952_c0_seq1
773bp
GTPase-activating_protein_[Enterocytozoon_bieneusi_H348]
FPKM:1.82 TPM:1.54
1450 A_TrvaMG_comp11954_c0_seq1
225bp
PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:2.13 TPM:1.79
1451 A_TrvaMG_comp1195513_c0_seq1
253bp
endochitinase_[Nosema_apis_BRL_01]
FPKM:0.93 TPM:0.78
1452 A_TrvaMG_comp11955_c0_seq1
206bp
FPKM:3.95 TPM:3.33
1453 A_TrvaMG_comp11956_c0_seq1
288bp
FPKM:2.74 TPM:2.31
1454 A_TrvaMG_comp1195806_c0_seq1
268bp
PREDICTED:_chromatin_assembly_factor_1_subunit_B_isoform_X2_[Papilio_xuthus]
GO:0000790 C chromatin
GO:0002230 P positive regulation of defense response to virus by host
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006334 P nucleosome assembly
GO:0006335 P DNA replication-dependent chromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0031497 P chromatin assembly
GO:0033186 C CAF-1 complex
GO:0042393 F histone binding
GO:0043234 C protein-containing complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
FPKM:1.34 TPM:1.13
1455 A_TrvaMG_comp11958_c0_seq1
514bp
hypothetical_protein_RR48_05219_[Papilio_machaon]
FPKM:1.10 TPM:0.93
1456 A_TrvaMG_comp119591_c0_seq1
544bp
FPKM:6.81 TPM:5.73
1457 A_TrvaMG_comp1195926_c0_seq1
259bp
PREDICTED:_AT-rich_interactive_domain-containing_protein_2-like_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.17 TPM:0.98
1458 A_TrvaMG_comp1196014_c0_seq1
285bp
putative_Thd1,_partial_[Operophtera_brumata]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001104 F transcription coregulator activity
GO:0003690 F double-stranded DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006285 P base-excision repair, AP site formation
GO:0006298 P mismatch repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008263 F pyrimidine-specific mismatch base pair DNA N-glycosylase activity
GO:0009790 P embryo development
GO:0016568 P chromatin organization
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0016799 F hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0019104 F DNA N-glycosylase activity
GO:0030983 F mismatched DNA binding
GO:0032091 P negative regulation of protein binding
GO:0032183 F SUMO binding
GO:0035562 P negative regulation of chromatin binding
GO:0040029 P regulation of gene expression, epigenetic
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0080111 P DNA demethylation
FPKM:0.94 TPM:0.79
1459 A_TrvaMG_comp11960_c0_seq1
459bp
FPKM:1.40 TPM:1.18
1460 A_TrvaMG_comp11962_c0_seq1
314bp
putative_uncharacterized_protein_[Firmicutes_bacterium_CAG:65]
FPKM:2.30 TPM:1.93
1461 A_TrvaMG_comp1196388_c0_seq1
205bp
hypothetical_protein_[Rhizobium_sp._CF122]
FPKM:1.72 TPM:1.45
1462 A_TrvaMG_comp11964_c0_seq1
244bp
PREDICTED:_leucine-rich_repeat-containing_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
FPKM:3.73 TPM:3.14
1463 A_TrvaMG_comp11965_c0_seq1
444bp
PREDICTED:_acylphosphatase-2_isoform_X2_[Amyelois_transitella]
GO:0003998 F acylphosphatase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0006796 P phosphate-containing compound metabolic process
GO:0016787 F hydrolase activity
FPKM:2.32 TPM:1.95
1464 A_TrvaMG_comp11966_c0_seq1
459bp
FPKM:1.70 TPM:1.43
1465 A_TrvaMG_comp11967_c0_seq1
407bp
FPKM:1.45 TPM:1.22
1466 A_TrvaMG_comp11968_c0_seq1
315bp
PREDICTED:_GPI_mannosyltransferase_4_isoform_X1_[Bombyx_mori]
FPKM:2.47 TPM:2.08
1467 A_TrvaMG_comp11969_c0_seq1
335bp
hypothetical_protein_[[Clostridium]_litorale]
FPKM:2.20 TPM:1.85
1468 A_TrvaMG_comp11970_c0_seq1
517bp
PREDICTED:_phospholipase_D3-like_[Amyelois_transitella]
FPKM:1.68 TPM:1.42
1469 A_TrvaMG_comp11971_c0_seq1
306bp
PREDICTED:_1-phosphatidylinositol_4,5-bisphosphate_phosphodiesterase_beta-1-like_[Salmo_salar]
FPKM:2.01 TPM:1.70
1470 A_TrvaMG_comp1197216_c0_seq1
285bp
Voltage-dependent_calcium_channel_subunit_alpha-2/delta-4_[Papilio_machaon]
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005246 F calcium channel regulator activity
GO:0005262 F calcium channel activity
GO:0005891 C voltage-gated calcium channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0046872 F metal ion binding
GO:0050908 P detection of light stimulus involved in visual perception
GO:0051924 P regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
FPKM:0.94 TPM:0.79
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