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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1411 A_TrvaMG_comp1192807_c0_seq1
243bp
hypothetical_protein_KGM_21809_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:0.69 TPM:0.58
1412 A_TrvaMG_comp11928_c0_seq1
627bp
FPKM:2.13 TPM:1.79
1413 A_TrvaMG_comp11929_c0_seq1
301bp
hypothetical_protein_VR64_14505_[Desulfatitalea_sp._BRH_c12]
FPKM:3.54 TPM:2.98
1414 A_TrvaMG_comp1193012_c0_seq1
204bp
FPKM:1.75 TPM:1.47
1415 A_TrvaMG_comp1193153_c0_seq1
201bp
PREDICTED:_uncharacterized_protein_LOC101735755_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004176 F ATP-dependent peptidase activity
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006508 P proteolysis
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:1.23 TPM:1.04
1416 A_TrvaMG_comp11932_c0_seq1
228bp
PREDICTED:_uncharacterized_protein_LOC107391635_[Nothobranchius_furzeri]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
FPKM:0.41 TPM:0.34
1417 A_TrvaMG_comp11932_c1_seq1
407bp
PREDICTED:_uncharacterized_protein_LOC106708507_isoform_X1_[Papilio_machaon]
FPKM:1.33 TPM:1.12
1418 A_TrvaMG_comp11933_c0_seq1
348bp
FPKM:2.84 TPM:2.39
1419 A_TrvaMG_comp119360_c0_seq1
567bp
PREDICTED:_putative_disease_resistance_protein_RGA1_[Ziziphus_jujuba]
FPKM:9.17 TPM:7.72
1420 A_TrvaMG_comp11938_c0_seq1
342bp
PREDICTED:_zinc_metalloproteinase_nas-14-like_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0017090 C meprin A complex
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:1.63 TPM:1.37
1421 A_TrvaMG_comp1193917_c0_seq1
208bp
PREDICTED:_extensin_[Plutella_xylostella]
FPKM:1.64 TPM:1.38
1422 A_TrvaMG_comp1194074_c0_seq1
207bp
Dipeptidase_2_[Papilio_xuthus]
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0008237 F metallopeptidase activity
GO:0008239 F dipeptidyl-peptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016787 F hydrolase activity
GO:0016805 F dipeptidase activity
GO:0016999 P antibiotic metabolic process
GO:0030336 P negative regulation of cell migration
GO:0031225 C anchored component of membrane
GO:0031528 C microvillus membrane
GO:0034235 F GPI anchor binding
GO:0035690 P cellular response to xenobiotic stimulus
GO:0042995 C cell projection
GO:0043027 F cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0050667 P homocysteine metabolic process
GO:0070573 F metallodipeptidase activity
GO:0071277 P cellular response to calcium ion
GO:0071732 P cellular response to nitric oxide
GO:0072341 F modified amino acid binding
FPKM:1.67 TPM:1.40
1423 A_TrvaMG_comp11940_c0_seq1
574bp
hypothetical_protein_OXYTRI_14534_[Oxytricha_trifallax]
FPKM:1.74 TPM:1.47
1424 A_TrvaMG_comp1194102_c0_seq1
322bp
FPKM:0.73 TPM:0.61
1425 A_TrvaMG_comp1194141_c0_seq1
202bp
diguanylate_cyclase_[Vibrio_toranzoniae]
FPKM:1.81 TPM:1.53
1426 A_TrvaMG_comp11941_c0_seq1
611bp
PREDICTED:_zinc_finger_protein_564-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.47 TPM:1.24
1427 A_TrvaMG_comp1194218_c0_seq1
249bp
predicted_protein_[Physcomitrella_patens]
FPKM:0.96 TPM:0.81
1428 A_TrvaMG_comp1194273_c0_seq1
234bp
PREDICTED:_uncharacterized_protein_LOC106131099_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.52 TPM:1.28
1429 A_TrvaMG_comp11942_c0_seq1
443bp
FPKM:2.11 TPM:1.78
1430 A_TrvaMG_comp1194321_c0_seq1
229bp
FPKM:1.21 TPM:1.02
1431 A_TrvaMG_comp119433_c0_seq1
295bp
transposase,_partial_[Halogeometricum_borinquense]
FPKM:6.95 TPM:5.85
1432 A_TrvaMG_comp1194386_c0_seq1
230bp
FPKM:0.80 TPM:0.67
1433 A_TrvaMG_comp11943_c0_seq1
363bp
hypothetical_protein_M413DRAFT_36810,_partial_[Hebeloma_cylindrosporum_h7]
FPKM:1.76 TPM:1.48
1434 A_TrvaMG_comp119441_c0_seq1
377bp
Lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_[Papilio_machaon]
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
FPKM:7.68 TPM:6.47
1435 A_TrvaMG_comp11944_c0_seq1
237bp
oxidoreductase_[Propionibacterium_freudenreichii]
FPKM:2.20 TPM:1.85
1436 A_TrvaMG_comp1194595_c0_seq1
222bp
non-heme_iron_hydroxylase_[Streptomyces_lusitanus]
FPKM:1.33 TPM:1.12
1437 A_TrvaMG_comp1194671_c0_seq1
249bp
PREDICTED:_probable_ATP-dependent_RNA_helicase_spindle-E_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
FPKM:1.29 TPM:1.08
1438 A_TrvaMG_comp11946_c0_seq1
432bp
vitellogenin_2_[Patiriella_regularis]
FPKM:1.87 TPM:1.57
1439 A_TrvaMG_comp11946_c1_seq1
260bp
FPKM:2.02 TPM:1.70
1440 A_TrvaMG_comp11947_c0_seq1
230bp
FPKM:3.59 TPM:3.02
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