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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1321 A_TrvaMG_comp11879_c0_seq1
668bp
FPKM:3.27 TPM:2.75
1322 A_TrvaMG_comp11879_c1_seq1
249bp
FPKM:4.82 TPM:4.06
1323 A_TrvaMG_comp11880_c0_seq1
473bp
FPKM:3.83 TPM:3.22
1324 A_TrvaMG_comp1188107_c0_seq1
285bp
PREDICTED:_PRKCA-binding_protein_isoform_X2_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0002092 P positive regulation of receptor internalization
GO:0003779 F actin binding
GO:0005080 F protein kinase C binding
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006605 P protein targeting
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0008022 F protein C-terminus binding
GO:0014069 C postsynaptic density
GO:0015844 P monoamine transport
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0019899 F enzyme binding
GO:0019904 F protein domain specific binding
GO:0021782 P glial cell development
GO:0030054 C cell junction
GO:0034315 P regulation of Arp2/3 complex-mediated actin nucleation
GO:0034316 P negative regulation of Arp2/3 complex-mediated actin nucleation
GO:0035556 P intracellular signal transduction
GO:0036294 P cellular response to decreased oxygen levels
GO:0042149 P cellular response to glucose starvation
GO:0042734 C presynaptic membrane
GO:0042802 F identical protein binding
GO:0043005 C neuron projection
GO:0043113 P receptor clustering
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050803 P regulation of synapse structure or activity
GO:0051015 F actin filament binding
GO:0051260 P protein homooligomerization
GO:0060292 P long-term synaptic depression
GO:0071933 F Arp2/3 complex binding
GO:0097061 P dendritic spine organization
GO:0097062 P dendritic spine maintenance
GO:0097481 C postsynaptic density
FPKM:0.94 TPM:0.79
1325 A_TrvaMG_comp11881_c0_seq1
1492bp
cyclin_L1_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0016607 C nuclear speck
GO:0019901 F protein kinase binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1901409 P positive regulation of phosphorylation of RNA polymerase II C-terminal domain
FPKM:3.14 TPM:2.65
1326 A_TrvaMG_comp11881_c1_seq1
292bp
FPKM:2.00 TPM:1.68
1327 A_TrvaMG_comp11882_c0_seq1
908bp
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_20_[Papilio_machaon]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:0.45 TPM:0.38
1328 A_TrvaMG_comp11882_c0_seq2
807bp
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_20_[Papilio_machaon]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:2.80 TPM:2.36
1329 A_TrvaMG_comp1188409_c0_seq1
202bp
PREDICTED:_transient_receptor_potential_cation_channel_trpm_isoform_X5_[Amyelois_transitella]
FPKM:1.81 TPM:1.53
1330 A_TrvaMG_comp1188424_c0_seq1
217bp
PREDICTED:_chondroitin_sulfate_proteoglycan_4_[Amyelois_transitella]
FPKM:1.43 TPM:1.20
1331 A_TrvaMG_comp1188444_c0_seq1
461bp
reverse_transcriptase,_partial_[Operophtera_brumata]
FPKM:0.80 TPM:0.67
1332 A_TrvaMG_comp11884_c0_seq1
303bp
Uncharacterized_protein_OBRU01_12190_[Operophtera_brumata]
FPKM:5.55 TPM:4.67
1333 A_TrvaMG_comp11885_c0_seq1
552bp
FPKM:3.38 TPM:2.84
1334 A_TrvaMG_comp11887_c0_seq1
619bp
cytochrome_P450,_family_315,_subfamily_a,_polypeptide_1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005739 C mitochondrion
GO:0006697 P ecdysone biosynthetic process
GO:0007391 P dorsal closure
GO:0007417 P central nervous system development
GO:0007494 P midgut development
GO:0008045 P motor neuron axon guidance
GO:0008258 P head involution
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031966 C mitochondrial membrane
GO:0042768 F ecdysteroid 2-hydroxylase activity
GO:0045456 P ecdysteroid biosynthetic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.86 TPM:1.57
1335 A_TrvaMG_comp11887_c0_seq2
501bp
cytochrome_P450,_family_315,_subfamily_a,_polypeptide_1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005739 C mitochondrion
GO:0006697 P ecdysone biosynthetic process
GO:0007391 P dorsal closure
GO:0007417 P central nervous system development
GO:0007494 P midgut development
GO:0008045 P motor neuron axon guidance
GO:0008258 P head involution
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031966 C mitochondrial membrane
GO:0042768 F ecdysteroid 2-hydroxylase activity
GO:0045456 P ecdysteroid biosynthetic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.11 TPM:0.93
1336 A_TrvaMG_comp11888_c0_seq1
658bp
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_28_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
FPKM:4.54 TPM:3.82
1337 A_TrvaMG_comp11889_c0_seq1
1413bp
PREDICTED:_zinc_finger_protein_501-like_isoform_X2_[Papilio_polytes]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.66 TPM:2.24
1338 A_TrvaMG_comp1188_c0_seq1
217bp
hypothetical_protein_cypCar_00033391_[Cyprinus_carpio]
FPKM:1.43 TPM:1.20
1339 A_TrvaMG_comp118904_c0_seq1
414bp
FPKM:3.06 TPM:2.57
1340 A_TrvaMG_comp11890_c0_seq1
718bp
PREDICTED:_DNA_replication_complex_GINS_protein_PSF3_[Papilio_xuthus]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
GO:0006271 P DNA strand elongation involved in DNA replication
FPKM:2.83 TPM:2.38
1341 A_TrvaMG_comp11890_c0_seq2
850bp
PREDICTED:_DNA_replication_complex_GINS_protein_PSF3_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
FPKM:0.65 TPM:0.55
1342 A_TrvaMG_comp1189197_c0_seq1
224bp
FPKM:1.29 TPM:1.09
1343 A_TrvaMG_comp11891_c0_seq1
637bp
FPKM:2.78 TPM:2.34
1344 A_TrvaMG_comp1189269_c0_seq1
243bp
dihydroorotate_dehydrogenase_electron_transfer_subunit_[Bacillus_okhensis]
FPKM:0.69 TPM:0.58
1345 A_TrvaMG_comp11892_c0_seq1
321bp
FPKM:2.57 TPM:2.16
1346 A_TrvaMG_comp1189324_c0_seq1
277bp
FPKM:1.00 TPM:0.84
1347 A_TrvaMG_comp1189353_c0_seq1
225bp
FPKM:0.85 TPM:0.72
1348 A_TrvaMG_comp11893_c0_seq1
553bp
FPKM:0.74 TPM:0.63
1349 A_TrvaMG_comp11893_c0_seq2
394bp
FPKM:0.42 TPM:0.35
1350 A_TrvaMG_comp118942_c0_seq1
312bp
FPKM:12.40 TPM:10.44
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