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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1291 A_TrvaMG_comp11858_c0_seq1
1490bp
PREDICTED:_nuclear_fragile_X_mental_retardation-interacting_protein_1_[Papilio_machaon]
GO:0000492 P box C/D snoRNP assembly
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005726 C perichromatin fibrils
GO:0005730 C nucleolus
GO:0008023 C transcription elongation factor complex
GO:0016363 C nuclear matrix
GO:0022626 C cytosolic ribosome
GO:0030515 F snoRNA binding
GO:0030674 F protein-macromolecule adaptor activity
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048786 C presynaptic active zone
GO:0051117 F ATPase binding
GO:0051259 P protein complex oligomerization
GO:0070761 C pre-snoRNP complex
FPKM:2.56 TPM:2.15
1292 A_TrvaMG_comp1186094_c0_seq1
203bp
FPKM:1.19 TPM:1.00
1293 A_TrvaMG_comp11861_c0_seq1
493bp
PREDICTED:_uncharacterized_protein_LOC101742727_[Bombyx_mori]
FPKM:3.06 TPM:2.58
1294 A_TrvaMG_comp11862_c0_seq1
322bp
hypothetical_protein_LOAG_05954_[Loa_loa]
FPKM:3.83 TPM:3.22
1295 A_TrvaMG_comp11863_c0_seq1
786bp
PREDICTED:_DNA-directed_RNA_polymerase_III_subunit_RPC5_[Bombyx_mori]
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005666 C RNA polymerase III complex
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0032481 P positive regulation of type I interferon production
GO:0045087 P innate immune response
GO:0051607 P defense response to virus
FPKM:0.79 TPM:0.66
1296 A_TrvaMG_comp11863_c0_seq2
1081bp
PREDICTED:_DNA-directed_RNA_polymerase_III_subunit_RPC5_[Bombyx_mori]
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0045087 P innate immune response
GO:0051607 P defense response to virus
FPKM:3.02 TPM:2.54
1297 A_TrvaMG_comp11864_c0_seq1
881bp
putative_BTB/POZ_domain-containing_protein_7_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0060693 P regulation of branching involved in salivary gland morphogenesis
FPKM:2.60 TPM:2.19
1298 A_TrvaMG_comp11865_c0_seq1
1030bp
PREDICTED:_UPF0692_protein_CG33108_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.75 TPM:2.32
1299 A_TrvaMG_comp1186629_c0_seq1
285bp
LacI_family_transcription_regulator_[Burkholderia_choica]
FPKM:0.94 TPM:0.79
1300 A_TrvaMG_comp1186680_c0_seq1
223bp
PREDICTED:_uncharacterized_protein_LOC105842714_[Bombyx_mori]
FPKM:1.75 TPM:1.47
1301 A_TrvaMG_comp11866_c0_seq1
267bp
FPKM:5.69 TPM:4.79
1302 A_TrvaMG_comp11867_c0_seq1
598bp
FPKM:2.61 TPM:2.20
1303 A_TrvaMG_comp11868_c0_seq1
357bp
FPKM:1.96 TPM:1.65
1304 A_TrvaMG_comp11870_c0_seq1
967bp
PREDICTED:_uncharacterized_protein_LOC106106774_[Papilio_polytes]
GO:0005102 F signaling receptor binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042102 P positive regulation of T cell proliferation
GO:0050860 P negative regulation of T cell receptor signaling pathway
GO:1900042 P positive regulation of interleukin-2 production
FPKM:3.08 TPM:2.59
1305 A_TrvaMG_comp1187161_c0_seq1
228bp
PREDICTED:_WD_repeat-containing_protein_81_isoform_X3_[Bombyx_mori]
FPKM:1.23 TPM:1.03
1306 A_TrvaMG_comp11871_c0_seq1
1039bp
PREDICTED:_ecdysteroid-inducible_angiotensin-converting_enzyme-related_gene_product_isoform_X1_[Bombyx_mori]
GO:0004180 F carboxypeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006508 P proteolysis
GO:0007289 P spermatid nucleus differentiation
GO:0007291 P sperm individualization
GO:0007552 P metamorphosis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008241 F peptidyl-dipeptidase activity
GO:0008270 F zinc ion binding
GO:0009609 P response to symbiotic bacterium
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:3.17 TPM:2.67
1307 A_TrvaMG_comp1187257_c0_seq1
249bp
FPKM:0.64 TPM:0.54
1308 A_TrvaMG_comp11872_c0_seq1
1075bp
heat_shock_protein_25.4_precursor_[Bombyx_mori]
FPKM:3.91 TPM:3.29
1309 A_TrvaMG_comp11873_c0_seq1
1322bp
PREDICTED:_gamma-butyrobetaine_dioxygenase_[Amyelois_transitella]
GO:0005506 F iron ion binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0008336 F gamma-butyrobetaine dioxygenase activity
GO:0016491 F oxidoreductase activity
GO:0045329 P carnitine biosynthetic process
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.51 TPM:2.11
1310 A_TrvaMG_comp1187408_c0_seq1
259bp
hypothetical_protein_UY34_C0008G0012_[Parcubacteria_group_bacterium_GW2011_GWA2_48_9]
FPKM:1.17 TPM:0.98
1311 A_TrvaMG_comp1187455_c0_seq1
204bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_51_homolog,_partial_[Plutella_xylostella]
FPKM:1.75 TPM:1.47
1312 A_TrvaMG_comp11874_c0_seq1
321bp
FPKM:4.40 TPM:3.70
1313 A_TrvaMG_comp11875_c0_seq1
639bp
FPKM:3.27 TPM:2.76
1314 A_TrvaMG_comp1187619_c0_seq1
207bp
FPKM:1.67 TPM:1.40
1315 A_TrvaMG_comp1187638_c0_seq1
212bp
Modifier_of_mdg4_[Operophtera_brumata]
FPKM:1.54 TPM:1.29
1316 A_TrvaMG_comp11877_c0_seq1
722bp
FPKM:1.45 TPM:1.22
1317 A_TrvaMG_comp11877_c1_seq1
613bp
PREDICTED:_serine/threonine_kinase_LKB1_isoform_X1_[Bombyx_mori]
FPKM:2.06 TPM:1.74
1318 A_TrvaMG_comp1187898_c0_seq1
209bp
FPKM:1.61 TPM:1.36
1319 A_TrvaMG_comp11878_c0_seq1
385bp
FPKM:3.04 TPM:2.56
1320 A_TrvaMG_comp1187978_c0_seq1
288bp
serine_protease_inhibitor_20_precursor_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0010951 P negative regulation of endopeptidase activity
FPKM:0.91 TPM:0.77
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