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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1231 A_TrvaMG_comp11821_c0_seq1
256bp
FPKM:5.70 TPM:4.79
1232 A_TrvaMG_comp1182299_c0_seq1
211bp
Os01g0167800,_partial_[Oryza_sativa_Japonica_Group]
FPKM:1.04 TPM:0.88
1233 A_TrvaMG_comp11822_c0_seq1
660bp
FPKM:3.02 TPM:2.54
1234 A_TrvaMG_comp11822_c1_seq1
544bp
FPKM:2.82 TPM:2.37
1235 A_TrvaMG_comp11823_c0_seq1
2987bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_35_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
FPKM:2.66 TPM:2.24
1236 A_TrvaMG_comp1182485_c0_seq1
212bp
polyprotein_gag_pol_of_ty1_copia_retrotransposon_[Lasius_niger]
FPKM:1.54 TPM:1.29
1237 A_TrvaMG_comp11824_c0_seq1
1849bp
PREDICTED:_connectin-like_isoform_X1_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0007413 P axonal fasciculation
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016200 P synaptic target attraction
GO:0031225 C anchored component of membrane
GO:0031594 C neuromuscular junction
GO:0044295 C axonal growth cone
FPKM:2.88 TPM:2.42
1238 A_TrvaMG_comp118251_c0_seq1
938bp
PREDICTED:_short_coiled-coil_protein_homolog_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0016020 C membrane
FPKM:5.49 TPM:4.62
1239 A_TrvaMG_comp11825_c0_seq1
902bp
FPKM:2.77 TPM:2.33
1240 A_TrvaMG_comp1182695_c0_seq1
211bp
FPKM:1.56 TPM:1.31
1241 A_TrvaMG_comp1182707_c0_seq1
216bp
FPKM:0.96 TPM:0.81
1242 A_TrvaMG_comp1182767_c0_seq1
241bp
FPKM:1.40 TPM:1.18
1243 A_TrvaMG_comp11827_c0_seq1
654bp
FPKM:2.44 TPM:2.06
1244 A_TrvaMG_comp11828_c0_seq1
688bp
PREDICTED:_protein_neuralized_isoform_X2_[Papilio_polytes]
GO:0000209 P protein polyubiquitination
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003677 F DNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007398 P ectoderm development
GO:0007399 P nervous system development
GO:0007419 P ventral cord development
GO:0007422 P peripheral nervous system development
GO:0007423 P sensory organ development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007616 P long-term memory
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0008356 P asymmetric cell division
GO:0008593 P regulation of Notch signaling pathway
GO:0016360 P sensory organ precursor cell fate determination
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0030718 P germ-line stem cell population maintenance
GO:0031987 P locomotion involved in locomotory behavior
GO:0042048 P olfactory behavior
GO:0045314 P regulation of compound eye photoreceptor development
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046331 P lateral inhibition
GO:0046532 P regulation of photoreceptor cell differentiation
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048749 P compound eye development
GO:0048854 P brain morphogenesis
GO:0051260 P protein homooligomerization
GO:0061630 F ubiquitin protein ligase activity
GO:1901981 F phosphatidylinositol phosphate binding
FPKM:1.77 TPM:1.49
1245 A_TrvaMG_comp11828_c0_seq2
600bp
PREDICTED:_protein_neuralized_isoform_X2_[Papilio_polytes]
GO:0000209 P protein polyubiquitination
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003677 F DNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007398 P ectoderm development
GO:0007399 P nervous system development
GO:0007419 P ventral cord development
GO:0007422 P peripheral nervous system development
GO:0007423 P sensory organ development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007616 P long-term memory
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0008356 P asymmetric cell division
GO:0008593 P regulation of Notch signaling pathway
GO:0016360 P sensory organ precursor cell fate determination
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0030718 P germ-line stem cell population maintenance
GO:0031987 P locomotion involved in locomotory behavior
GO:0042048 P olfactory behavior
GO:0045314 P regulation of compound eye photoreceptor development
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046331 P lateral inhibition
GO:0046532 P regulation of photoreceptor cell differentiation
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048749 P compound eye development
GO:0048854 P brain morphogenesis
GO:0051260 P protein homooligomerization
GO:0061630 F ubiquitin protein ligase activity
GO:1901981 F phosphatidylinositol phosphate binding
FPKM:0.00 TPM:0.00
1246 A_TrvaMG_comp1183025_c0_seq1
421bp
PREDICTED:_growth_arrest-specific_protein_1-like_[Bombyx_mori]
FPKM:0.69 TPM:0.58
1247 A_TrvaMG_comp1183169_c0_seq1
211bp
PREDICTED:_protein_unc-13_homolog_A_isoform_X3_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006887 P exocytosis
GO:0007268 P chemical synaptic transmission
GO:0016020 C membrane
GO:0019992 F diacylglycerol binding
GO:0030054 C cell junction
GO:0035556 P intracellular signal transduction
GO:0042734 C presynaptic membrane
GO:0045202 C synapse
GO:0046872 F metal ion binding
GO:0046928 P regulation of neurotransmitter secretion
FPKM:1.56 TPM:1.31
1248 A_TrvaMG_comp11831_c0_seq1
416bp
FPKM:1.28 TPM:1.08
1249 A_TrvaMG_comp1183293_c0_seq1
247bp
GCN5_family_acetyltransferase_[Gallaecimonas_pentaromativorans]
FPKM:1.64 TPM:1.38
1250 A_TrvaMG_comp11833_c0_seq1
2292bp
minichromosome_maintenance_complex_component_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
FPKM:2.54 TPM:2.14
1251 A_TrvaMG_comp11834_c0_seq1
1464bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101740376_[Bombyx_mori]
FPKM:2.14 TPM:1.80
1252 A_TrvaMG_comp118357_c0_seq1
376bp
FPKM:2.20 TPM:1.86
1253 A_TrvaMG_comp1183590_c0_seq1
250bp
PREDICTED:_transcription_factor_hamlet-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0008285 P negative regulation of cell population proliferation
GO:0014017 P neuroblast fate commitment
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0050773 P regulation of dendrite development
FPKM:1.27 TPM:1.07
1254 A_TrvaMG_comp11835_c0_seq1
350bp
PREDICTED:_exportin-6_[Bombyx_mori]
FPKM:0.97 TPM:0.81
1255 A_TrvaMG_comp11835_c0_seq2
1159bp
PREDICTED:_exportin-6_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
FPKM:2.15 TPM:1.81
1256 A_TrvaMG_comp11836_c0_seq1
2803bp
Polycomb_protein_Asx_[Papilio_xuthus]
GO:0000785 C chromatin
GO:0001709 P cell fate determination
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007469 P antennal development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0035517 C PR-DUB complex
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0035800 F deubiquitinase activator activity
GO:0045498 P sex comb development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:2000152 P regulation of ubiquitin-specific protease activity
GO:2000158 P positive regulation of ubiquitin-specific protease activity
FPKM:2.07 TPM:1.74
1257 A_TrvaMG_comp1183752_c0_seq1
254bp
PREDICTED:_protein_tweety-like_[Bombyx_mori]
FPKM:0.92 TPM:0.77
1258 A_TrvaMG_comp11837_c0_seq1
309bp
FPKM:3.56 TPM:2.99
1259 A_TrvaMG_comp1183878_c0_seq1
248bp
PREDICTED:_uncharacterized_protein_LOC101745789_isoform_X2_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0007155 P cell adhesion
GO:0031012 C extracellular matrix
GO:0045087 P innate immune response
GO:0046872 F metal ion binding
FPKM:0.97 TPM:0.82
1260 A_TrvaMG_comp11838_c0_seq1
1355bp
PREDICTED:_tumor_protein_p63-regulated_gene_1-like_protein_isoform_X2_[Bombyx_mori]
GO:0008021 C synaptic vesicle
GO:0030054 C cell junction
GO:0031410 C cytoplasmic vesicle
GO:0042802 F identical protein binding
GO:0045202 C synapse
GO:0070062 C extracellular exosome
FPKM:2.36 TPM:1.99
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