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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

1201

A_TrvaMG_comp1180471_c0_seq1

223bp

FPKM:1.31 TPM:1.10

1202

A_TrvaMG_comp11804_c0_seq1

208bp

FPKM:8.19 TPM:6.90

1203

A_TrvaMG_comp1180530_c0_seq1

269bp

hypothetical_protein_SCLCIDRAFT_29834_[Scleroderma_citrinum_Foug_A]

FPKM:0.80 TPM:0.67

1204

A_TrvaMG_comp1180655_c0_seq1

212bp

FPKM:1.54 TPM:1.29

1205

A_TrvaMG_comp1180656_c0_seq1

281bp

PREDICTED:_72_kDa_inositol_polyphosphate_5-phosphatase_[Papilio_machaon]

GO:0001726	C	ruffle
GO:0004439	F	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
GO:0004445	F	inositol-polyphosphate 5-phosphatase activity
GO:0005737	C	cytoplasm
GO:0005794	C	Golgi apparatus
GO:0005856	C	cytoskeleton
GO:0005886	C	plasma membrane
GO:0005929	C	cilium
GO:0005930	C	axoneme
GO:0006629	P	lipid metabolic process
GO:0010976	P	positive regulation of neuron projection development
GO:0016020	C	membrane
GO:0016787	F	hydrolase activity
GO:0032580	C	Golgi cisterna membrane
GO:0042995	C	cell projection
GO:0046856	P	phosphatidylinositol dephosphorylation

FPKM:0.96 TPM:0.81

1206

A_TrvaMG_comp11806_c0_seq1

247bp

hypothetical_protein_KGM_00180_[Danaus_plexippus]

GO:0003677	F	DNA binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005730	C	nucleolus
GO:0005737	C	cytoplasm
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006366	P	transcription by RNA polymerase II
GO:0006469	P	negative regulation of protein kinase activity
GO:0008023	C	transcription elongation factor complex

FPKM:7.55 TPM:6.36

1207

A_TrvaMG_comp11806_c1_seq1

1167bp

hypothetical_protein_KGM_00180_[Danaus_plexippus]

GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007379	P	segment specification
GO:0008023	C	transcription elongation factor complex
GO:0009952	P	anterior/posterior pattern specification
GO:0070062	C	extracellular exosome
GO:0090090	P	negative regulation of canonical Wnt signaling pathway
GO:2000096	P	positive regulation of Wnt signaling pathway, planar cell polarity pathway

FPKM:2.08 TPM:1.75

1208

A_TrvaMG_comp1180798_c0_seq1

224bp

PREDICTED:_low-density_lipoprotein_receptor_isoform_X3_[Papilio_xuthus]

FPKM:0.86 TPM:0.73

1209

A_TrvaMG_comp11807_c0_seq1

204bp

PREDICTED:_uncharacterized_protein_LOC106078787_[Biomphalaria_glabrata]

FPKM:3.50 TPM:2.95

1210

A_TrvaMG_comp1180846_c0_seq1

208bp

PREDICTED:_cyclin-dependent_kinase_inhibitor_1-like_[Balearica_regulorum_gibbericeps]

FPKM:1.64 TPM:1.38

1211

A_TrvaMG_comp11808_c0_seq1

906bp

FPKM:2.84 TPM:2.39

1212

A_TrvaMG_comp1180907_c0_seq1

230bp

FPKM:1.60 TPM:1.34

1213

A_TrvaMG_comp11809_c0_seq1

829bp

FPKM:3.03 TPM:2.55

1214

A_TrvaMG_comp11810_c0_seq1

228bp

FPKM:2.86 TPM:2.41

1215

A_TrvaMG_comp11811_c0_seq1

295bp

Reverse_transcriptase_(RNA-dependent_DNA_polymerase),_putative_[Oryza_sativa_Japonica_Group]

FPKM:2.17 TPM:1.83

1216

A_TrvaMG_comp11811_c1_seq1

593bp

FPKM:2.23 TPM:1.87

1217

A_TrvaMG_comp11812_c0_seq1

1735bp

F-box/LRR-repeat_protein_16_[Papilio_machaon]

GO:0005737

cytoplasm

FPKM:2.82 TPM:2.37

1218

A_TrvaMG_comp11813_c0_seq1

838bp

PREDICTED:_exosome_complex_component_CSL4_[Amyelois_transitella]

GO:0000176	C	nuclear exosome (RNase complex)
GO:0000178	C	exosome (RNase complex)
GO:0003723	F	RNA binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005730	C	nucleolus
GO:0005737	C	cytoplasm
GO:0006364	P	rRNA processing
GO:0006396	P	RNA processing

FPKM:3.08 TPM:2.59

1219

A_TrvaMG_comp1181452_c0_seq1

258bp

PREDICTED:_tropinone_reductase_homolog_At2g29170-like_[Citrus_sinensis]

FPKM:0.88 TPM:0.74

1220

A_TrvaMG_comp1181534_c0_seq1

247bp

PREDICTED:_dual_specificity_protein_phosphatase_23-like_[Amyelois_transitella]

GO:0004721	F	phosphoprotein phosphatase activity
GO:0004722	F	protein serine/threonine phosphatase activity
GO:0004725	F	protein tyrosine phosphatase activity
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0006470	P	protein dephosphorylation
GO:0008138	F	protein tyrosine/serine/threonine phosphatase activity
GO:0016311	P	dephosphorylation
GO:0016787	F	hydrolase activity
GO:0016791	F	phosphatase activity
GO:0035335	P	peptidyl-tyrosine dephosphorylation
GO:0070062	C	extracellular exosome

FPKM:0.98 TPM:0.83

1221

A_TrvaMG_comp1181556_c0_seq1

256bp

PREDICTED:_uncharacterized_protein_LOC101746166_[Bombyx_mori]

FPKM:0.90 TPM:0.76

1222

A_TrvaMG_comp1181683_c0_seq1

207bp

PREDICTED:_bumetanide-sensitive_sodium-(potassium)-chloride_cotransporter-like_[Bombyx_mori]

GO:0005215	F	transporter activity
GO:0006810	P	transport
GO:0006811	P	ion transport
GO:0006813	P	potassium ion transport
GO:0006814	P	sodium ion transport
GO:0006821	P	chloride transport
GO:0015293	F	symporter activity
GO:0015377	F	cation:chloride symporter activity
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0055085	P	transmembrane transport
GO:1902476	P	chloride transmembrane transport

FPKM:1.11 TPM:0.93

1223

A_TrvaMG_comp1181982_c0_seq1

253bp

FPKM:0.93 TPM:0.78

1224

A_TrvaMG_comp11819_c0_seq1

720bp

PREDICTED:_TM2_domain-containing_protein_almondex_[Papilio_machaon]

GO:0001713	P	ectodermal cell fate determination
GO:0003674	F	molecular_function
GO:0005575	C	cellular_component
GO:0007219	P	Notch signaling pathway
GO:0007220	P	Notch receptor processing
GO:0007275	P	multicellular organism development
GO:0007398	P	ectoderm development
GO:0007498	P	mesoderm development
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0044214	C	spanning component of plasma membrane
GO:0045747	P	positive regulation of Notch signaling pathway
GO:0046331	P	lateral inhibition