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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1141 A_TrvaMG_comp11781_c0_seq1
214bp
FPKM:2.49 TPM:2.09
1142 A_TrvaMG_comp1178207_c0_seq1
204bp
FPKM:1.75 TPM:1.47
1143 A_TrvaMG_comp11782_c0_seq1
810bp
FPKM:2.42 TPM:2.04
1144 A_TrvaMG_comp1178325_c0_seq1
245bp
FPKM:1.34 TPM:1.13
1145 A_TrvaMG_comp11783_c0_seq1
933bp
PREDICTED:_uncharacterized_protein_LOC101742413_isoform_X1_[Bombyx_mori]
FPKM:1.94 TPM:1.63
1146 A_TrvaMG_comp1178460_c0_seq1
250bp
PREDICTED:_mucin-5AC_[Amyelois_transitella]
FPKM:1.27 TPM:1.07
1147 A_TrvaMG_comp1178463_c0_seq1
227bp
FPKM:1.66 TPM:1.40
1148 A_TrvaMG_comp11784_c0_seq1
460bp
hypothetical_protein_[Plasmodium_berghei_strain_ANKA],_partial_[Plasmodium_berghei_ANKA]
FPKM:2.80 TPM:2.35
1149 A_TrvaMG_comp1178502_c0_seq1
220bp
PREDICTED:_long-chain_fatty_acid_transport_protein_4-like_[Amyelois_transitella]
FPKM:1.37 TPM:1.15
1150 A_TrvaMG_comp1178591_c0_seq1
265bp
hypothetical_protein_RR48_05217_[Papilio_machaon]
FPKM:0.83 TPM:0.70
1151 A_TrvaMG_comp11785_c0_seq1
1537bp
putative_fatty_acyl_reductase_FAR1_[Spodoptera_litura]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
FPKM:2.51 TPM:2.12
1152 A_TrvaMG_comp11786_c0_seq1
367bp
FPKM:3.73 TPM:3.14
1153 A_TrvaMG_comp1178711_c0_seq1
203bp
FPKM:1.78 TPM:1.50
1154 A_TrvaMG_comp11787_c0_seq1
1975bp
PREDICTED:_pre-mRNA_cleavage_complex_2_protein_Pcf11-like_isoform_X1_[Bombyx_mori]
GO:0000993 F RNA polymerase II complex binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0005849 C mRNA cleavage factor complex
GO:0006369 P termination of RNA polymerase II transcription
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
FPKM:2.51 TPM:2.11
1155 A_TrvaMG_comp11788_c0_seq1
448bp
FPKM:2.39 TPM:2.01
1156 A_TrvaMG_comp11788_c0_seq2
472bp
FPKM:0.00 TPM:0.00
1157 A_TrvaMG_comp11789_c0_seq1
1380bp
PREDICTED:_zinc_finger_CCCH-type_with_G_patch_domain-containing_protein_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.41 TPM:2.03
1158 A_TrvaMG_comp11790_c0_seq1
798bp
Alpha-(1,3)-fucosyltransferase_10_[Operophtera_brumata]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006486 P protein glycosylation
GO:0008417 F fucosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0032580 C Golgi cisterna membrane
GO:0036065 P fucosylation
GO:0046920 F alpha-(1->3)-fucosyltransferase activity
FPKM:2.98 TPM:2.51
1159 A_TrvaMG_comp1179131_c0_seq1
230bp
FPKM:1.20 TPM:1.01
1160 A_TrvaMG_comp1179141_c0_seq1
201bp
26S_proteasome_regulatory_complex_protein_[Ordospora_colligata_OC4]
FPKM:1.85 TPM:1.55
1161 A_TrvaMG_comp11791_c0_seq1
422bp
FPKM:3.76 TPM:3.17
1162 A_TrvaMG_comp1179217_c0_seq1
206bp
PREDICTED:_uncharacterized_protein_K02A2.6-like_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
FPKM:1.13 TPM:0.95
1163 A_TrvaMG_comp117924_c0_seq1
233bp
FPKM:5.77 TPM:4.85
1164 A_TrvaMG_comp11792_c0_seq1
1178bp
PREDICTED:_probable_asparagine--tRNA_ligase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004816 F asparagine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006421 P asparaginyl-tRNA aminoacylation
GO:0016874 F ligase activity
FPKM:2.53 TPM:2.13
1165 A_TrvaMG_comp11792_c1_seq1
366bp
putative_aspartyl-tRNA_synthetase_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004816 F asparagine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006421 P asparaginyl-tRNA aminoacylation
GO:0016874 F ligase activity
FPKM:3.46 TPM:2.92
1166 A_TrvaMG_comp1179353_c0_seq1
241bp
PREDICTED:_solute_carrier_family_22_member_1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005277 F acetylcholine transmembrane transporter activity
GO:0005329 F dopamine:sodium symporter activity
GO:0005333 F norepinephrine:sodium symporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006836 P neurotransmitter transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008504 F monoamine transmembrane transporter activity
GO:0008513 F secondary active organic cation transmembrane transporter activity
GO:0010248 P establishment or maintenance of transmembrane electrochemical gradient
GO:0015101 F organic cation transmembrane transporter activity
GO:0015651 F quaternary ammonium group transmembrane transporter activity
GO:0015695 P organic cation transport
GO:0015697 P quaternary ammonium group transport
GO:0015844 P monoamine transport
GO:0015872 P dopamine transport
GO:0015874 P norepinephrine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0022857 F transmembrane transporter activity
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0048241 P epinephrine transport
GO:0051260 P protein homooligomerization
GO:0055085 P transmembrane transport
GO:0072488 P ammonium transmembrane transport
GO:1901374 P acetate ester transport
FPKM:1.40 TPM:1.18
1167 A_TrvaMG_comp11793_c0_seq1
630bp
FPKM:2.37 TPM:2.00
1168 A_TrvaMG_comp117942_c0_seq1
397bp
hypothetical_protein_KGM_20501_[Danaus_plexippus]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
FPKM:9.94 TPM:8.37
1169 A_TrvaMG_comp117947_c0_seq1
1190bp
PREDICTED:_gelsolin-like_[Amyelois_transitella]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0006909 P phagocytosis
GO:0030041 P actin filament polymerization
GO:0045010 P actin nucleation
GO:0046872 F metal ion binding
GO:0051014 P actin filament severing
GO:0051016 P barbed-end actin filament capping
FPKM:7.27 TPM:6.12
1170 A_TrvaMG_comp11794_c0_seq1
687bp
PREDICTED:_protein_melted_isoform_X3_[Bombyx_mori]
GO:0001708 P cell fate specification
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0007275 P multicellular organism development
GO:0007398 P ectoderm development
GO:0007422 P peripheral nervous system development
GO:0008152 P metabolic process
GO:0008286 P insulin receptor signaling pathway
GO:0010314 F phosphatidylinositol-5-phosphate binding
GO:0016020 C membrane
GO:0030730 P sequestering of triglyceride
GO:0035091 F phosphatidylinositol binding
GO:0045464 P R8 cell fate specification
GO:2001020 P regulation of response to DNA damage stimulus
FPKM:2.58 TPM:2.17
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