SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp11787_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA_cleavage_complex_2_protein_Pcf11-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0000993 F RNA polymerase II complex binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0005849 C mRNA cleavage factor complex
GO:0006369 P termination of RNA polymerase II transcription
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
Transcript
Level		FPKM:2.51 TPM:2.11
ORF EntryO_TrvaMG401_internal:A_TrvaMG_comp11787_c0_seq1
Sequence
(Nucleotide)
GTTGTGTCTGTCGGTCGGCGGGTCGGTGTCCATGGGCTCGGGCCGGGCGCGGGGCGGGGG
CGGCGCGGCCAGGCCCGGCACCGTGGCGCCCTCCATGTTGGCGATGTGCACGTAGCCCGG
ACGGATGTTCCTGGGCAGAGCCGAGAACCTCACAAAGAACTTCTCGTTCCCTATCGTTAT
GGGCTTGGGTAAATCACCAAACTCAACTTTAAATGGCTGCTCGTTTATTAAGACAGTTTT
CAATGAATCTACAAATCGGATAGTAAAGAATTGTCCGTTGATGGTGAACTTCTGCACTTT
AGCGTCGAGGTAGACGGGGCACATCTGCGTGGCGTTGACGATGAGGTTGATCTTGCCGGC
GACGAGGTCGGTGCGCTTCACCTTCCCGATGTCGACCTGCGGCAGCGGCCCCTCCAGCTG
CACCAGGCGCGGCCGACCCTCGATGAGGATGCCGACGGGCTGTCCGCCGAAGAAGCACTC
GTACCAGCGCCCGTTGATGCACAGCTCGCGCGTCGGGGCACCGAACCTGATATCGAATAT
CTGATCGTCTATTTCCACTTGTCTGTAGTCTTCGTTGAACGACAGAACCACAGAGTCTTT
GTTGTCGAAGGTGACCCGCCTCGAGCCGGGGAGGAACTTGATCTCTCTGGGGTCGTCCCA
GTCGAGCATGATGACCGCGGTGTCACCGTAGAACCTTATCTCGCGAGGTACTCCATCTAT
TTGTATGGTCTTCACCGGGTCCTGTTCGATGTATTCTAATATTCTGTAGTCGGTGGGTGG
GATGGCGAACCCGGGTGCACCTAGCGGAGGAGGGGACTCGCTTCTCACGTAGGGCTGCAG
TGGACTTTCTCCTTGTAAGATCCCGAGCCTAGGAGTTGGCATGGGATGGGCGAGGCGAGG
GTCGAACGGCGGTCGCATTCCTCTGCTGTCAAACTTCCCTCTGAAGAACGGCAACGGTCC
TCTAAATCTTCGCGGACCAAATTCATCTATCATAGGGCGTGGTCCCCTCCACATGGGCGG
GAACGGTCCGAACATGGGCACCATGGGCGGCCTGGTCATCATGCCAGGTATCTGCGGTCC
GTCCATGGCATCCATCGGCGCTACCCGCATGTCGGAGTCCTGCCTGAACTCTTGTCCGAT
GGGCATGTTCTCAATGAAGGTTGTGGGTGGAACTCTTTCGTCGATGTCACCGAAGTTATT
TTCGCTGGGCGATAATTTGTGCATCGGAACTTTGATGTTATCATCCCGTATGTGTGCATT
TAGCTTTCTTTTAGAGACTTCAAGAGATTCTCTCTGTTTAGCTTCTTTCAATTTCAGTTT
TTCGTTGAGTTGAAGAACTTGACAGACAAGAGTGTTGTATTGATTTTTATCTATCTGTCC
ATCACTGTACTGTTCTTTGGCCTGCGACATGATAATGTTGATTGTCTTCTTGTGATCCTC
GGTGTCAAATTCATCAGAATTTTCGTTTCTGAGGTCGATGTCTTCTGAACTTATAGTACG
TTTCCTTTCTCTTTCAACGCTTGGAGATTTACCAAAAAGAAGCGGTCTGCCAAGGCTATC
CTTGCCTTTAGTGGCCTCTGCAAGTTTGGCTCGAACCAGATCCAATTTAGATGGAGTCTT
CCGTTCCTTCTTCTCCTTGACTTCATTCCAGTCTTTTTGTTTGGGTGAGTTACGAGGAGA
GACAGATTTCTCAGGCGAACGCTTTAGATCATCGGATTTGGGTGACATTGACACCATCGA
AGCTGGGGTGACTTCATCCACTTGAGGCAATTTGCGAAGATCCACGTCTTCATTACCGAA
AAGAATATCAAACTTGTCAAGTTTGTTTCTTTTAGGTTTTCCTTCGAGGGTTTCAGTGGA
GGGCCTTTTATGTGCGATAGCGGCAGGCGTCGGCTCCACCGGCTGAAGCACCCTAAGATC
AATGTCCTTATTCTCGACGACTACATCGGGTACACTTGAGGCGGGCGCGGGGGCG
(1975 bp)

- SilkBase 1999-2023 -