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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1021 A_TrvaMG_comp11721_c1_seq1
246bp
integrase_[Bacillus_thermotolerans]
FPKM:1.99 TPM:1.68
1022 A_TrvaMG_comp1172276_c0_seq1
233bp
hypothetical_protein_OT06_49580,_partial_[Candidatus_Thiomargarita_nelsonii]
FPKM:1.54 TPM:1.29
1023 A_TrvaMG_comp1172286_c0_seq1
216bp
FPKM:1.45 TPM:1.22
1024 A_TrvaMG_comp11722_c0_seq1
786bp
PREDICTED:_G_protein-coupled_receptor_kinase_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0003384 P apical constriction involved in gastrulation
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004703 F G protein-coupled receptor kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007474 P imaginal disc-derived wing vein specification
GO:0008589 P regulation of smoothened signaling pathway
GO:0008592 P regulation of Toll signaling pathway
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030154 P cell differentiation
GO:0043950 P positive regulation of cAMP-mediated signaling
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0048477 P oogenesis
GO:0048601 P oocyte morphogenesis
GO:0050830 P defense response to Gram-positive bacterium
FPKM:2.61 TPM:2.19
1025 A_TrvaMG_comp1172333_c0_seq1
353bp
FPKM:0.62 TPM:0.52
1026 A_TrvaMG_comp11723_c0_seq1
288bp
nucleotide_excision_repair_protein_[Bombyx_mori]
GO:0000111 C nucleotide-excision repair factor 2 complex
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010777 P meiotic mismatch repair involved in reciprocal meiotic recombination
GO:0071942 C XPC complex
FPKM:0.00 TPM:0.00
1027 A_TrvaMG_comp11723_c0_seq2
887bp
nucleotide_excision_repair_protein_[Bombyx_mori]
GO:0000111 C nucleotide-excision repair factor 2 complex
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010777 P meiotic mismatch repair involved in reciprocal meiotic recombination
GO:0071942 C XPC complex
FPKM:1.62 TPM:1.37
1028 A_TrvaMG_comp11724_c0_seq1
216bp
FPKM:1.93 TPM:1.62
1029 A_TrvaMG_comp117252_c0_seq1
568bp
hypothetical_protein_[Pantoea_sp._AS-PWVM4]
FPKM:3.02 TPM:2.55
1030 A_TrvaMG_comp1172582_c0_seq1
204bp
isoleucyl-tRNA_synthetase_[Encephalitozoon_hellem_ATCC_50504]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004822 F isoleucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006428 P isoleucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
FPKM:1.17 TPM:0.98
1031 A_TrvaMG_comp11725_c0_seq1
1195bp
putative_apoptosis_antagonizing_transcription_factor_[Operophtera_brumata]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006357 P regulation of transcription by RNA polymerase II
FPKM:3.08 TPM:2.59
1032 A_TrvaMG_comp11725_c1_seq1
578bp
putative_apoptosis_antagonizing_transcription_factor_[Operophtera_brumata]
FPKM:2.45 TPM:2.06
1033 A_TrvaMG_comp117260_c0_seq1
324bp
FPKM:4.68 TPM:3.94
1034 A_TrvaMG_comp1172623_c0_seq1
224bp
hypothetical_protein_KGM_06922_[Danaus_plexippus]
FPKM:1.29 TPM:1.09
1035 A_TrvaMG_comp11726_c0_seq1
3773bp
PREDICTED:_zinc_finger_protein_Xfin-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.90 TPM:1.60
1036 A_TrvaMG_comp117276_c0_seq1
577bp
FPKM:7.80 TPM:6.56
1037 A_TrvaMG_comp1172792_c0_seq1
235bp
Zinc_finger_protein_[Operophtera_brumata]
FPKM:1.13 TPM:0.95
1038 A_TrvaMG_comp11727_c0_seq1
555bp
FPKM:1.52 TPM:1.28
1039 A_TrvaMG_comp1172841_c0_seq1
207bp
FPKM:1.11 TPM:0.93
1040 A_TrvaMG_comp11728_c0_seq1
495bp
serine_protease_inhibitor_2_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
FPKM:3.49 TPM:2.94
1041 A_TrvaMG_comp1172906_c0_seq1
458bp
PREDICTED:_uncharacterized_protein_LOC101254423_[Solanum_lycopersicum]
FPKM:0.70 TPM:0.59
1042 A_TrvaMG_comp1172944_c0_seq1
275bp
FPKM:1.01 TPM:0.85
1043 A_TrvaMG_comp11729_c0_seq1
240bp
hypothetical_protein_FE78DRAFT_31279_[Acidomyces_richmondensis]
FPKM:5.67 TPM:4.77
1044 A_TrvaMG_comp11729_c1_seq1
224bp
FPKM:0.00 TPM:0.00
1045 A_TrvaMG_comp1173024_c0_seq1
239bp
PREDICTED:_uncharacterized_protein_LOC105384231_[Plutella_xylostella]
FPKM:1.43 TPM:1.21
1046 A_TrvaMG_comp11730_c0_seq1
694bp
PREDICTED:_protein_enabled_[Bombyx_mori]
GO:0003382 P epithelial cell morphogenesis
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005911 C cell-cell junction
GO:0005912 C adherens junction
GO:0007010 P cytoskeleton organization
GO:0007015 P actin filament organization
GO:0007298 P border follicle cell migration
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007390 P germ-band shortening
GO:0007391 P dorsal closure
GO:0007396 P suture of dorsal opening
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008258 P head involution
GO:0008360 P regulation of cell shape
GO:0010591 P regulation of lamellipodium assembly
GO:0017124 F SH3 domain binding
GO:0030027 C lamellipodium
GO:0030036 P actin cytoskeleton organization
GO:0030335 P positive regulation of cell migration
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031252 C cell leading edge
GO:0031346 P positive regulation of cell projection organization
GO:0032433 C filopodium tip
GO:0032956 P regulation of actin cytoskeleton organization
GO:0035262 P gonad morphogenesis
GO:0042995 C cell projection
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0048749 P compound eye development
GO:0048813 P dendrite morphogenesis
GO:0051489 P regulation of filopodium assembly
GO:0051491 P positive regulation of filopodium assembly
GO:0060288 P formation of a compartment boundary
GO:0071212 C subsynaptic reticulum
GO:1990255 P subsynaptic reticulum organization
FPKM:3.44 TPM:2.90
1047 A_TrvaMG_comp1173109_c0_seq1
207bp
FPKM:1.67 TPM:1.40
1048 A_TrvaMG_comp1173116_c0_seq1
225bp
FPKM:0.43 TPM:0.36
1049 A_TrvaMG_comp117313_c0_seq1
1750bp
hypothetical_protein_KGM_13996_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
FPKM:5.01 TPM:4.21
1050 A_TrvaMG_comp1173156_c0_seq1
223bp
PREDICTED:_uncharacterized_protein_LOC106103118_[Papilio_polytes]
FPKM:0.87 TPM:0.74
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