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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1051 A_TrvaMG_comp117319_c0_seq1
1788bp
PREDICTED:_UDP-glucuronic_acid_decarboxylase_1_isoform_X1_[Papilio_polytes]
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0032580 C Golgi cisterna membrane
GO:0033320 P UDP-D-xylose biosynthetic process
GO:0042803 F protein homodimerization activity
GO:0048040 F UDP-glucuronate decarboxylase activity
GO:0051262 P protein tetramerization
GO:0070062 C extracellular exosome
GO:0070403 F NAD+ binding
FPKM:6.36 TPM:5.36
1052 A_TrvaMG_comp11731_c0_seq1
1923bp
PREDICTED:_arginyl-tRNA--protein_transferase_1_[Papilio_polytes]
GO:0004057 F arginyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016598 P protein arginylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
FPKM:2.00 TPM:1.68
1053 A_TrvaMG_comp11731_c0_seq2
803bp
PREDICTED:_arginyl-tRNA--protein_transferase_1_[Plutella_xylostella]
GO:0004057 F arginyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016598 P protein arginylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
FPKM:0.53 TPM:0.44
1054 A_TrvaMG_comp1173204_c0_seq1
233bp
PREDICTED:_F-box/LRR-repeat_protein_7_[Papilio_polytes]
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
FPKM:1.54 TPM:1.29
1055 A_TrvaMG_comp1173267_c0_seq1
235bp
XRE_family_transcriptional_regulator_[[Clostridium]_clariflavum]
FPKM:1.13 TPM:0.95
1056 A_TrvaMG_comp11732_c0_seq1
1901bp
septin_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000281 P mitotic cytokinesis
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005875 C microtubule associated complex
GO:0005940 C septin ring
GO:0007049 P cell cycle
GO:0007349 P cellularization
GO:0031105 C septin complex
GO:0031625 F ubiquitin protein ligase binding
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045172 C germline ring canal
GO:0051301 P cell division
GO:0070938 C contractile ring
FPKM:2.50 TPM:2.10
1057 A_TrvaMG_comp1173392_c0_seq1
235bp
FPKM:1.13 TPM:0.95
1058 A_TrvaMG_comp11733_c0_seq1
812bp
FPKM:2.55 TPM:2.15
1059 A_TrvaMG_comp11735_c0_seq1
210bp
hypothetical_protein_[Bacillus_manliponensis]
FPKM:6.31 TPM:5.32
1060 A_TrvaMG_comp11735_c0_seq2
240bp
hypothetical_protein_[Bacillus_manliponensis]
FPKM:0.38 TPM:0.32
1061 A_TrvaMG_comp11736_c0_seq1
362bp
FPKM:4.27 TPM:3.59
1062 A_TrvaMG_comp11738_c0_seq1
874bp
FPKM:2.23 TPM:1.88
1063 A_TrvaMG_comp11738_c0_seq2
558bp
FPKM:0.56 TPM:0.47
1064 A_TrvaMG_comp11740_c0_seq1
322bp
FPKM:2.00 TPM:1.69
1065 A_TrvaMG_comp1174138_c0_seq1
211bp
hypothetical_protein_RR48_12638_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0016032 P viral process
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0019028 C viral capsid
GO:0019076 P viral release from host cell
GO:0039660 F structural constituent of virion
GO:0039702 P viral budding via host ESCRT complex
GO:0046755 P viral budding
GO:0046872 F metal ion binding
FPKM:0.52 TPM:0.44
1066 A_TrvaMG_comp1174174_c0_seq1
230bp
FPKM:1.20 TPM:1.01
1067 A_TrvaMG_comp117418_c0_seq1
883bp
PREDICTED:_zinc_finger_CCCH_domain-containing_protein_11A-like_[Bombyx_mori]
GO:0000346 C transcription export complex
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0031124 P mRNA 3'-end processing
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051028 P mRNA transport
FPKM:6.74 TPM:5.67
1068 A_TrvaMG_comp11741_c0_seq1
261bp
FPKM:3.43 TPM:2.89
1069 A_TrvaMG_comp11742_c0_seq1
394bp
FPKM:3.82 TPM:3.22
1070 A_TrvaMG_comp1174320_c0_seq1
275bp
PREDICTED:_uncharacterized_protein_LOC106129438_[Amyelois_transitella]
FPKM:1.01 TPM:0.85
1071 A_TrvaMG_comp1174370_c0_seq1
279bp
PREDICTED:_uncharacterized_protein_LOC101735755_[Bombyx_mori]
FPKM:0.98 TPM:0.82
1072 A_TrvaMG_comp11743_c0_seq1
1031bp
PREDICTED:_arf-GAP_domain_and_FG_repeat-containing_protein_1_isoform_X1_[Bombyx_mori]
FPKM:2.23 TPM:1.87
1073 A_TrvaMG_comp11743_c1_seq1
340bp
PREDICTED:_arf-GAP_domain_and_FG_repeat-containing_protein_1_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0016023 C cytoplasmic vesicle
GO:0030154 P cell differentiation
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
FPKM:3.46 TPM:2.91
1074 A_TrvaMG_comp11744_c0_seq1
311bp
FPKM:1.39 TPM:1.17
1075 A_TrvaMG_comp11746_c0_seq1
352bp
PREDICTED:_uncharacterized_protein_LOC106106066_[Papilio_polytes]
FPKM:3.09 TPM:2.60
1076 A_TrvaMG_comp1174706_c0_seq1
202bp
aminopeptidase_[Pseudoduganella_violaceinigra]
FPKM:1.81 TPM:1.53
1077 A_TrvaMG_comp1174749_c0_seq1
210bp
PREDICTED:_histone-lysine_N-methyltransferase_trithorax-like_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0035097 C histone methyltransferase complex
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0051568 P histone H3-K4 methylation
FPKM:1.59 TPM:1.34
1078 A_TrvaMG_comp11747_c0_seq1
514bp
FPKM:3.56 TPM:3.00
1079 A_TrvaMG_comp1174831_c0_seq1
336bp
PREDICTED:_uncharacterized_protein_K02A2.6-like_[Amyelois_transitella]
FPKM:0.67 TPM:0.57
1080 A_TrvaMG_comp11748_c0_seq1
424bp
FPKM:2.53 TPM:2.13
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