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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

871

A_ErmoMG_comp16726_c0_seq1

296bp

hypothetical_protein_PHYSODRAFT_483185_[Phytophthora_sojae]

FPKM:4.09 TPM:3.01

872

A_ErmoMG_comp16727_c0_seq1

311bp

FPKM:1.97 TPM:1.45

873

A_ErmoMG_comp16728_c0_seq1

487bp

FPKM:2.80 TPM:2.06

874

A_ErmoMG_comp16730_c0_seq1

558bp

PREDICTED:_uncharacterized_protein_LOC101741222_isoform_X2_[Bombyx_mori]

FPKM:2.77 TPM:2.04

875

A_ErmoMG_comp16732_c0_seq1

391bp

PREDICTED:_DEAD-box_ATP-dependent_RNA_helicase_50_isoform_X2_[Nicotiana_sylvestris]

FPKM:3.28 TPM:2.41

876

A_ErmoMG_comp16733_c0_seq1

370bp

PREDICTED:_eIF2B-gamma_protein_isoform_X1_[Bombyx_mori]

GO:0003743	F	translation initiation factor activity
GO:0005085	F	guanyl-nucleotide exchange factor activity
GO:0005737	C	cytoplasm
GO:0005851	C	eukaryotic translation initiation factor 2B complex
GO:0006412	P	translation
GO:0006413	P	translational initiation
GO:0008135	F	translation factor activity, RNA binding
GO:0009058	P	biosynthetic process
GO:0014003	P	oligodendrocyte development
GO:0016779	F	nucleotidyltransferase activity
GO:0043547	P	positive regulation of GTPase activity
GO:0051716	P	cellular response to stimulus

FPKM:3.09 TPM:2.28

877

A_ErmoMG_comp16734_c0_seq1

329bp

hypothetical_protein_Y032_0124g1205_[Ancylostoma_ceylanicum]

FPKM:2.18 TPM:1.60

878

A_ErmoMG_comp16735_c0_seq1

599bp

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065-like_[Bombyx_mori]

GO:0003674	F	molecular_function
GO:0005575	C	cellular_component
GO:0008150	P	biological_process

FPKM:2.52 TPM:1.86

879

A_ErmoMG_comp16736_c0_seq1

616bp

hypothetical_protein_RP20_CCG012365_[Aedes_albopictus]

GO:0003676	F	nucleic acid binding
GO:0003964	F	RNA-directed DNA polymerase activity
GO:0004190	F	aspartic-type endopeptidase activity
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0006278	P	RNA-dependent DNA biosynthetic process
GO:0006508	P	proteolysis
GO:0008233	F	peptidase activity
GO:0015074	P	DNA integration
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity
GO:0016787	F	hydrolase activity
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis

FPKM:2.83 TPM:2.08

880

A_ErmoMG_comp16738_c0_seq1

480bp

PREDICTED:_R3H_domain-containing_protein_2_isoform_X2_[Bombyx_mori]

FPKM:3.08 TPM:2.27

881

A_ErmoMG_comp16738_c1_seq1

261bp

PREDICTED:_R3H_domain-containing_protein_2_isoform_X2_[Bombyx_mori]

FPKM:3.10 TPM:2.28

882

A_ErmoMG_comp16739_c0_seq1

248bp

PREDICTED:_zinc_finger_protein_585A-like_[Amyelois_transitella]

FPKM:2.78 TPM:2.05

883

A_ErmoMG_comp16740_c0_seq1

1495bp

FPKM:1.98 TPM:1.46

884

A_ErmoMG_comp16742_c0_seq1

550bp

FPKM:2.46 TPM:1.81

885

A_ErmoMG_comp16743_c0_seq1

451bp

FPKM:2.65 TPM:1.95

886

A_ErmoMG_comp16745_c0_seq1

560bp

PREDICTED:_transportin-1_[Bombyx_mori]

GO:0000059	P	obsolete protein import into nucleus, docking
GO:0000060	P	obsolete protein import into nucleus, translocation
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0006607	P	NLS-bearing protein import into nucleus
GO:0006610	P	ribosomal protein import into nucleus
GO:0006810	P	transport
GO:0006886	P	intracellular protein transport
GO:0008139	F	nuclear localization sequence binding
GO:0008536	F	small GTPase binding
GO:0008565	F	obsolete protein transporter activity
GO:0015031	P	protein transport
GO:0016032	P	viral process
GO:0031965	C	nuclear membrane
GO:0034399	C	nuclear periphery
GO:0043488	P	regulation of mRNA stability
GO:0044822	F	RNA binding
GO:0070062	C	extracellular exosome
GO:0072372	C	cilium

FPKM:1.78 TPM:1.31

887

A_ErmoMG_comp16746_c0_seq1

552bp

FPKM:1.91 TPM:1.40

888

A_ErmoMG_comp16747_c0_seq1

515bp

TIGR00266_family_protein_[Methanosphaerula_palustris]

FPKM:2.19 TPM:1.61

889

A_ErmoMG_comp16748_c0_seq1

494bp

PREDICTED:_WASH_complex_subunit_FAM21_[Amyelois_transitella]

GO:0005515	F	protein binding
GO:0005546	F	phosphatidylinositol-4,5-bisphosphate binding
GO:0005547	F	phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005730	C	nucleolus
GO:0005737	C	cytoplasm
GO:0005768	C	endosome
GO:0005769	C	early endosome
GO:0005829	C	cytosol
GO:0005886	C	plasma membrane
GO:0006810	P	transport
GO:0008289	F	lipid binding
GO:0010314	F	phosphatidylinositol-5-phosphate binding
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0030904	C	retromer complex
GO:0031901	C	early endosome membrane
GO:0032266	F	phosphatidylinositol-3-phosphate binding
GO:0042147	P	retrograde transport, endosome to Golgi
GO:0043231	C	intracellular membrane-bounded organelle
GO:0043325	F	phosphatidylinositol-3,4-bisphosphate binding
GO:0070273	F	phosphatidylinositol-4-phosphate binding
GO:0071203	C	WASH complex
GO:0080025	F	phosphatidylinositol-3,5-bisphosphate binding
GO:1900024	P	regulation of substrate adhesion-dependent cell spreading
GO:1990126	P	endocytic recycling
GO:2000813	P	negative regulation of barbed-end actin filament capping

FPKM:2.22 TPM:1.63

890

A_ErmoMG_comp16749_c0_seq1

893bp

PREDICTED:_DNA_ligase_4-like_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0003677	F	DNA binding
GO:0003909	F	DNA ligase activity
GO:0003910	F	DNA ligase (ATP) activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0005958	C	DNA-dependent protein kinase-DNA ligase 4 complex
GO:0006260	P	DNA replication
GO:0006273	P	lagging strand elongation
GO:0006281	P	DNA repair
GO:0006297	P	nucleotide-excision repair, DNA gap filling
GO:0006303	P	double-strand break repair via nonhomologous end joining
GO:0006310	P	DNA recombination
GO:0006974	P	cellular response to DNA damage stimulus
GO:0007049	P	cell cycle
GO:0016874	F	ligase activity
GO:0032807	C	DNA ligase IV complex
GO:0033152	P	immunoglobulin V(D)J recombination
GO:0046872	F	metal ion binding
GO:0051103	P	DNA ligation involved in DNA repair
GO:0051301	P	cell division
GO:0070419	C	nonhomologous end joining complex
GO:0071897	P	DNA biosynthetic process

FPKM:2.08 TPM:1.53

891

A_ErmoMG_comp16750_c0_seq1

536bp

PREDICTED:_uncharacterized_protein_LOC106132372_[Amyelois_transitella]

FPKM:2.55 TPM:1.88

892

A_ErmoMG_comp16751_c0_seq1

508bp

PREDICTED:_transmembrane_protein_136-like_[Papilio_polytes]

FPKM:2.34 TPM:1.72

893

A_ErmoMG_comp16753_c0_seq1

770bp

FPKM:2.19 TPM:1.61

894

A_ErmoMG_comp16753_c1_seq1

326bp

glutamate_oxaloacetate_transaminase_2,_isoform_A_[Drosophila_melanogaster]

FPKM:2.01 TPM:1.48

895

A_ErmoMG_comp16754_c0_seq1

741bp

dicer_1,_partial_[Spodoptera_litura]

GO:0000166	F	nucleotide binding
GO:0003723	F	RNA binding
GO:0003725	F	double-stranded RNA binding
GO:0003727	F	single-stranded RNA binding
GO:0004386	F	helicase activity
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0004525	F	ribonuclease III activity
GO:0004530	F	deoxyribonuclease I activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0006309	P	apoptotic DNA fragmentation
GO:0006396	P	RNA processing
GO:0007279	P	pole cell formation
GO:0007294	P	germarium-derived oocyte fate determination
GO:0007367	P	segment polarity determination
GO:0016246	P	RNA interference
GO:0016442	C	RISC complex
GO:0016443	F	bidentate ribonuclease III activity
GO:0016787	F	hydrolase activity
GO:0016891	F	endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422	P	production of siRNA involved in RNA interference
GO:0030727	P	germarium-derived female germ-line cyst formation
GO:0031047	P	gene silencing by RNA
GO:0031054	P	pre-miRNA processing
GO:0033227	P	dsRNA transport
GO:0035087	P	siRNA loading onto RISC involved in RNA interference
GO:0035196	P	production of miRNAs involved in gene silencing by miRNA
GO:0042078	P	germ-line stem cell division
GO:0042594	P	response to starvation
GO:0045448	P	mitotic cell cycle, embryonic
GO:0046872	F	metal ion binding
GO:0048813	P	dendrite morphogenesis
GO:0070883	F	pre-miRNA binding
GO:0090501	P	RNA phosphodiester bond hydrolysis
GO:0090502	P	RNA phosphodiester bond hydrolysis, endonucleolytic