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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
901 A_ErmoMG_comp16760_c0_seq1
325bp
FPKM:1.62 TPM:1.19
902 A_ErmoMG_comp16761_c0_seq1
453bp
FPKM:3.04 TPM:2.24
903 A_ErmoMG_comp16762_c0_seq1
256bp
FPKM:4.21 TPM:3.09
904 A_ErmoMG_comp16763_c0_seq1
635bp
PREDICTED:_exostosin-3_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001888 F glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007367 P segment polarity determination
GO:0008101 P BMP signaling pathway
GO:0008375 F acetylglucosaminyltransferase activity
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015014 P heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030201 P heparan sulfate proteoglycan metabolic process
GO:0030210 P heparin biosynthetic process
GO:0042328 F heparan sulfate N-acetylglucosaminyltransferase activity
GO:0046872 F metal ion binding
FPKM:2.34 TPM:1.72
905 A_ErmoMG_comp16764_c0_seq1
561bp
hypothetical_protein_KGM_17131_[Danaus_plexippus]
FPKM:3.29 TPM:2.42
906 A_ErmoMG_comp16765_c0_seq1
676bp
PREDICTED:_uncharacterized_protein_LOC101737406_isoform_X1_[Bombyx_mori]
FPKM:2.44 TPM:1.80
907 A_ErmoMG_comp16766_c0_seq1
346bp
hypothetical_protein_AC578_10063_[Mycosphaerella_eumusae]
FPKM:3.09 TPM:2.27
908 A_ErmoMG_comp16767_c0_seq1
868bp
PREDICTED:_protein_ELYS_isoform_X2_[Bombyx_mori]
FPKM:2.36 TPM:1.74
909 A_ErmoMG_comp16768_c0_seq1
622bp
FPKM:1.94 TPM:1.43
910 A_ErmoMG_comp16769_c0_seq1
286bp
FPKM:4.11 TPM:3.02
911 A_ErmoMG_comp16770_c0_seq1
271bp
PREDICTED:_gastrula_zinc_finger_protein_XlCGF8.2DB-like,_partial_[Austrofundulus_limnaeus]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0071363 P cellular response to growth factor stimulus
FPKM:2.94 TPM:2.16
912 A_ErmoMG_comp16770_c0_seq2
352bp
PREDICTED:_zinc_finger_protein_664-like_isoform_X2_[Oreochromis_niloticus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:0.66 TPM:0.49
913 A_ErmoMG_comp16771_c0_seq1
319bp
PREDICTED:_4-coumarate--CoA_ligase_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004497 F monooxygenase activity
GO:0005524 F ATP binding
GO:0005777 C peroxisome
GO:0008152 P metabolic process
GO:0008218 P bioluminescence
GO:0016491 F oxidoreductase activity
GO:0046872 F metal ion binding
GO:0047077 F Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.93 TPM:2.16
914 A_ErmoMG_comp16773_c0_seq1
411bp
Transcriptional_adapter_2-alpha_[Operophtera_brumata]
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016573 P histone acetylation
GO:0035066 P positive regulation of histone acetylation
GO:0042789 P mRNA transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0070461 C SAGA-type complex
FPKM:4.00 TPM:2.95
915 A_ErmoMG_comp16775_c0_seq1
248bp
FPKM:3.82 TPM:2.81
916 A_ErmoMG_comp16776_c0_seq1
210bp
PREDICTED:_integral_membrane_protein_GPR180-like_[Papilio_machaon]
FPKM:6.40 TPM:4.71
917 A_ErmoMG_comp16777_c0_seq1
333bp
FPKM:2.14 TPM:1.57
918 A_ErmoMG_comp16778_c0_seq1
899bp
PREDICTED:_wolframin_isoform_X4_[Bombyx_mori]
FPKM:2.51 TPM:1.85
919 A_ErmoMG_comp16779_c0_seq1
781bp
PREDICTED:_biotin--protein_ligase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000785 C chromatin
GO:0003824 F catalytic activity
GO:0004077 F biotin-[acetyl-CoA-carboxylase] ligase activity
GO:0004078 F biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity
GO:0004079 F biotin-[methylmalonyl-CoA-carboxytransferase] ligase activity
GO:0004080 F biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity
GO:0005524 F ATP binding
GO:0005652 C nuclear lamina
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006464 P cellular protein modification process
GO:0008152 P metabolic process
GO:0008283 P cell population proliferation
GO:0009305 P protein biotinylation
GO:0009374 F biotin binding
GO:0016363 C nuclear matrix
GO:0016570 P histone modification
GO:0016874 F ligase activity
GO:0018271 F biotin-protein ligase activity
GO:0019899 F enzyme binding
GO:0042803 F protein homodimerization activity
GO:0070781 P response to biotin
GO:0071110 P histone biotinylation
FPKM:2.16 TPM:1.59
920 A_ErmoMG_comp16780_c0_seq1
319bp
hypothetical_protein_RR48_06038_[Papilio_machaon]
FPKM:3.77 TPM:2.77
921 A_ErmoMG_comp16781_c0_seq1
487bp
FPKM:0.96 TPM:0.71
922 A_ErmoMG_comp16781_c0_seq2
446bp
FPKM:1.36 TPM:1.00
923 A_ErmoMG_comp16782_c0_seq1
205bp
FPKM:5.73 TPM:4.22
924 A_ErmoMG_comp16784_c0_seq1
660bp
FPKM:2.66 TPM:1.96
925 A_ErmoMG_comp16785_c0_seq1
542bp
PREDICTED:_histone-lysine_N-methyltransferase,_H3_lysine-79_specific,_partial_[Papilio_polytes]
GO:0000781 C chromosome, telomeric region
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006348 P subtelomeric heterochromatin assembly
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030702 P pericentric heterochromatin assembly
GO:0031151 F histone methyltransferase activity (H3-K79 specific)
GO:0032259 P methylation
GO:0034729 P histone H3-K79 methylation
GO:0035097 C histone methyltransferase complex
GO:0046331 P lateral inhibition
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0051726 P regulation of cell cycle
GO:2000637 P positive regulation of gene silencing by miRNA
FPKM:1.90 TPM:1.40
926 A_ErmoMG_comp16785_c0_seq2
511bp
Histone-lysine_N-methyltransferase,_H3_lysine-79_specific_[Papilio_xuthus]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006342 P heterochromatin assembly
GO:0008134 F transcription factor binding
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031151 F histone methyltransferase activity (H3-K79 specific)
GO:0032200 P telomere organization
GO:0032259 P methylation
GO:0034729 P histone H3-K79 methylation
GO:0042054 F histone methyltransferase activity
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0051726 P regulation of cell cycle
GO:2000677 P regulation of transcription regulatory region DNA binding
FPKM:1.47 TPM:1.08
927 A_ErmoMG_comp16786_c0_seq1
340bp
FPKM:3.75 TPM:2.76
928 A_ErmoMG_comp16787_c0_seq1
759bp
PREDICTED:_serine_protease_inhibitor_6_isoform_X1_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
GO:0042060 P wound healing
GO:0042730 P fibrinolysis
GO:0043066 P negative regulation of apoptotic process
FPKM:2.53 TPM:1.87
929 A_ErmoMG_comp16788_c0_seq1
270bp
PREDICTED:_FACT_complex_subunit_spt16_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
FPKM:5.48 TPM:4.03
930 A_ErmoMG_comp16789_c0_seq1
459bp
FPKM:3.05 TPM:2.24
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