SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp16745_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transportin-1_[Bombyx_mori]
Ontology
GO:0000059 P obsolete protein import into nucleus, docking
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006610 P ribosomal protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008139 F nuclear localization sequence binding
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016032 P viral process
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0043488 P regulation of mRNA stability
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:0072372 C cilium
Transcript
Level		FPKM:1.78 TPM:1.31
ORF EntryO_ErmoMG177_3prime_partial:A_ErmoMG_comp16745_c0_seq1
Sequence
(Nucleotide)
TGATGCCACCACTAATAAATAAATGGAATGTACTTAAGGACGAAGACAAAGATTTATTCC
CATTATTGGAGTGTTTATCATCAGTGGCCACAGCTCTGCAGTCTGGATTTTTACCTTACT
GTGAACCAGTATTCAGGAGATGTGTTTCTTTAATAGAACAGACACTCAACCAAAACCTTT
ATTTCGAACAGGCTAATTCTCAAAGTCCGGATCAGTTTGATGCACCTGACAAAGAATTTA
TGATTGTTGCTCTGGATTTGTTGAGTGGCTTGGCTGAAGGATTAGATGGACATATTGAAC
GTCTAGTTCTTAATTCAAACCTAATGCAGCTGTTGTACCAGTGTATGCAGGATCCTATGC
CTGAGGTTCGCCAGTCTTCGTTTGCGTTACTTGGTGATCTCACAAAAGCGTGTTTCCAAC
ATGTCCTACCGTATATACCGGAGTTCCTACCCATACTCGGAGCGAACCTCAATCCTGAAC
TCATATCTGTGTGCAATAACGCTACCTGGGCTATAGGAGAAATCAGTATCAAACTAGGTC
ATGACACATCAAAGTATATG
(560 bp)

- SilkBase 1999-2023 -