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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
661 A_ErmoMG_comp164934_c0_seq1
1125bp
Dihydropyridine-sensitive_l-type_calcium_channel_[Operophtera_brumata]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.69 TPM:1.98
662 A_ErmoMG_comp16493_c0_seq1
1077bp
PREDICTED:_TELO2-interacting_protein_1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0031931 C TORC1 complex
GO:0031932 C TORC2 complex
GO:0032006 P regulation of TOR signaling
FPKM:2.63 TPM:1.94
663 A_ErmoMG_comp16494_c0_seq1
596bp
FPKM:2.95 TPM:2.17
664 A_ErmoMG_comp16498_c0_seq1
1021bp
PREDICTED:_uncharacterized_protein_LOC101735858_[Bombyx_mori]
FPKM:2.12 TPM:1.56
665 A_ErmoMG_comp16499_c0_seq1
1105bp
PREDICTED:_zinc_finger_protein_426-like_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.86 TPM:2.11
666 A_ErmoMG_comp16500_c0_seq1
446bp
FPKM:2.69 TPM:1.98
667 A_ErmoMG_comp16504_c0_seq1
441bp
FPKM:3.11 TPM:2.29
668 A_ErmoMG_comp16505_c0_seq1
555bp
FPKM:2.52 TPM:1.86
669 A_ErmoMG_comp16506_c0_seq1
405bp
putative_THO_complex_subunit_3_[Danaus_plexippus]
GO:0000445 C THO complex part of transcription export complex
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0051028 P mRNA transport
FPKM:3.95 TPM:2.91
670 A_ErmoMG_comp16507_c0_seq1
273bp
FPKM:4.23 TPM:3.11
671 A_ErmoMG_comp16508_c0_seq1
635bp
FPKM:2.34 TPM:1.72
672 A_ErmoMG_comp16510_c0_seq1
753bp
FPKM:2.50 TPM:1.84
673 A_ErmoMG_comp16513_c0_seq1
382bp
PREDICTED:_uncharacterized_protein_LOC106132264_[Amyelois_transitella]
FPKM:3.25 TPM:2.39
674 A_ErmoMG_comp16514_c0_seq1
214bp
adenylate_and_Guanylate_cyclase_catalytic_domain_protein_[Acinetobacter_baumannii_655378]
FPKM:3.54 TPM:2.60
675 A_ErmoMG_comp16515_c0_seq1
264bp
PREDICTED:_voltage-dependent_L-type_calcium_channel_subunit_beta-2_isoform_X3_[Plutella_xylostella]
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005891 C voltage-gated calcium channel complex
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007268 P chemical synaptic transmission
GO:0007528 P neuromuscular junction development
GO:0008331 F high voltage-gated calcium channel activity
GO:0016020 C membrane
GO:0016529 C sarcoplasmic reticulum
GO:0030315 C T-tubule
GO:0034765 P regulation of ion transmembrane transport
GO:0042383 C sarcolemma
GO:0070588 P calcium ion transmembrane transport
GO:1901385 P regulation of voltage-gated calcium channel activity
FPKM:3.03 TPM:2.23
676 A_ErmoMG_comp16516_c0_seq1
675bp
PREDICTED:_histone_deacetylase_6_isoform_X2_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006476 P protein deacetylation
GO:0014003 P oligodendrocyte development
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0019899 F enzyme binding
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0033558 F protein deacetylase activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070932 P histone H3 deacetylation
FPKM:2.24 TPM:1.64
677 A_ErmoMG_comp16517_c0_seq1
1397bp
PREDICTED:_golgin_subfamily_A_member_4-like_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0000139 C Golgi membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0043001 P Golgi to plasma membrane protein transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0045773 P positive regulation of axon extension
GO:0051020 F GTPase binding
GO:0070062 C extracellular exosome
FPKM:2.44 TPM:1.79
678 A_ErmoMG_comp16518_c0_seq1
283bp
Coiled-coil-helix-coiled-coil-helix_domain-containing_protein_8_[Papilio_xuthus]
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0033617 P mitochondrial cytochrome c oxidase assembly
FPKM:6.56 TPM:4.82
679 A_ErmoMG_comp16520_c0_seq1
234bp
Tubulin-specific_chaperone_D_[Papilio_machaon]
GO:0000226 P microtubule cytoskeleton organization
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005923 C bicellular tight junction
GO:0006457 P protein folding
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0010812 P negative regulation of cell-substrate adhesion
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0031115 P negative regulation of microtubule polymerization
GO:0034333 P adherens junction assembly
GO:0043547 P positive regulation of GTPase activity
GO:0048487 F beta-tubulin binding
GO:0070830 P bicellular tight junction assembly
FPKM:1.49 TPM:1.10
680 A_ErmoMG_comp16520_c0_seq2
497bp
PREDICTED:_tubulin-specific_chaperone_D_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005923 C bicellular tight junction
GO:0006457 P protein folding
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0010812 P negative regulation of cell-substrate adhesion
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0031115 P negative regulation of microtubule polymerization
GO:0034333 P adherens junction assembly
GO:0043547 P positive regulation of GTPase activity
GO:0048487 F beta-tubulin binding
GO:0070830 P bicellular tight junction assembly
FPKM:3.27 TPM:2.41
681 A_ErmoMG_comp16521_c0_seq1
346bp
PREDICTED:_uncharacterized_protein_LOC106113963,_partial_[Papilio_xuthus]
FPKM:5.45 TPM:4.01
682 A_ErmoMG_comp16523_c0_seq1
351bp
FPKM:3.19 TPM:2.35
683 A_ErmoMG_comp16524_c0_seq1
251bp
hypothetical_protein_T12_6945,_partial_[Trichinella_patagoniensis]
FPKM:4.73 TPM:3.48
684 A_ErmoMG_comp16525_c0_seq1
800bp
defective_in_cullin_neddylation_protein_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0009314 P response to radiation
GO:0010225 P response to UV-C
GO:0010332 P response to gamma radiation
GO:0016020 C membrane
GO:0030308 P negative regulation of cell growth
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032182 F ubiquitin-like protein binding
GO:0043065 P positive regulation of apoptotic process
GO:0045116 P protein neddylation
GO:0048471 C perinuclear region of cytoplasm
GO:0051443 P positive regulation of ubiquitin-protein transferase activity
GO:0097602 F cullin family protein binding
FPKM:2.40 TPM:1.76
685 A_ErmoMG_comp16526_c0_seq1
701bp
scaffold_protein_salvador_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005912 C adherens junction
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007444 P imaginal disc development
GO:0008285 P negative regulation of cell population proliferation
GO:0010212 P response to ionizing radiation
GO:0032947 F molecular adaptor activity
GO:0035329 P hippo signaling
GO:0040014 P regulation of multicellular organism growth
GO:0042127 P regulation of cell population proliferation
GO:0043065 P positive regulation of apoptotic process
GO:0045464 P R8 cell fate specification
GO:0045570 P regulation of imaginal disc growth
GO:0046621 P negative regulation of organ growth
GO:0046666 P retinal cell programmed cell death
GO:0048814 P regulation of dendrite morphogenesis
GO:0048863 P stem cell differentiation
GO:0072002 P Malpighian tubule development
GO:0072089 P stem cell proliferation
FPKM:2.46 TPM:1.81
686 A_ErmoMG_comp16526_c1_seq1
693bp
scaffold_protein_salvador_[Bombyx_mori]
FPKM:2.15 TPM:1.58
687 A_ErmoMG_comp16527_c0_seq1
292bp
FPKM:3.95 TPM:2.90
688 A_ErmoMG_comp16528_c0_seq1
284bp
PREDICTED:_glucose_dehydrogenase_[FAD,_quinone]-like_[Bombyx_mori]
FPKM:3.91 TPM:2.87
689 A_ErmoMG_comp16529_c0_seq1
736bp
PREDICTED:_dual_serine/threonine_and_tyrosine_protein_kinase-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
FPKM:2.01 TPM:1.48
690 A_ErmoMG_comp16530_c0_seq1
768bp
FPKM:2.62 TPM:1.93
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