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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
691 A_ErmoMG_comp16531_c0_seq1
221bp
FPKM:2.21 TPM:1.63
692 A_ErmoMG_comp16531_c0_seq2
236bp
FPKM:5.17 TPM:3.80
693 A_ErmoMG_comp16532_c0_seq1
358bp
cyclin_dependent_kinase_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
FPKM:3.26 TPM:2.40
694 A_ErmoMG_comp16533_c0_seq1
498bp
PREDICTED:_irregular_chiasm_C-roughest_protein-like_isoform_X3_[Bombyx_mori]
GO:0001745 P compound eye morphogenesis
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007409 P axonogenesis
GO:0007520 P myoblast fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016202 P regulation of striated muscle tissue development
GO:0030165 F PDZ domain binding
GO:0042802 F identical protein binding
GO:0045177 C apical part of cell
GO:0046331 P lateral inhibition
GO:0046666 P retinal cell programmed cell death
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048749 P compound eye development
FPKM:1.25 TPM:0.92
695 A_ErmoMG_comp16534_c0_seq1
496bp
FPKM:3.57 TPM:2.63
696 A_ErmoMG_comp16535_c0_seq1
560bp
FPKM:3.03 TPM:2.23
697 A_ErmoMG_comp16537_c0_seq1
869bp
unknown_unsecreted_protein_[Papilio_polytes]
FPKM:0.75 TPM:0.55
698 A_ErmoMG_comp16537_c0_seq2
789bp
unknown_unsecreted_protein_[Papilio_polytes]
FPKM:1.80 TPM:1.33
699 A_ErmoMG_comp16538_c0_seq1
538bp
PREDICTED:_uncharacterized_protein_LOC106720041_isoform_X2_[Papilio_machaon]
FPKM:2.54 TPM:1.87
700 A_ErmoMG_comp16538_c0_seq2
431bp
putative_YLP_motif_containing_1,_partial_[Operophtera_brumata]
FPKM:2.44 TPM:1.80
701 A_ErmoMG_comp16540_c0_seq1
704bp
PREDICTED:_RAD50-interacting_protein_1_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0048193 P Golgi vesicle transport
GO:0060628 P regulation of ER to Golgi vesicle-mediated transport
GO:0070939 C Dsl1/NZR complex
GO:1902504 P mitotic G2 DNA damage checkpoint signaling
FPKM:3.11 TPM:2.29
702 A_ErmoMG_comp16541_c0_seq1
407bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]
GO:0005622 C intracellular anatomical structure
GO:0006623 P protein targeting to vacuole
GO:0019898 C extrinsic component of membrane
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
FPKM:3.22 TPM:2.37
703 A_ErmoMG_comp165434_c0_seq1
1044bp
PREDICTED:_exosome_complex_component_RRP4_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0000467 P exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0004532 F exoribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006364 P rRNA processing
GO:0008312 F 7S RNA binding
GO:0030307 P positive regulation of cell growth
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0043488 P regulation of mRNA stability
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0071034 P CUT catabolic process
GO:0071035 P nuclear polyadenylation-dependent rRNA catabolic process
GO:0071038 P nuclear polyadenylation-dependent tRNA catabolic process
GO:0071049 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
FPKM:3.47 TPM:2.55
704 A_ErmoMG_comp16543_c0_seq1
926bp
PREDICTED:_E3_ubiquitin-protein_ligase_Rnf220_isoform_X2_[Bombyx_mori]
FPKM:2.66 TPM:1.96
705 A_ErmoMG_comp16547_c0_seq1
329bp
transcription_elongation_factor_S-II_[Danaus_plexippus]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008270 F zinc ion binding
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0046872 F metal ion binding
FPKM:3.77 TPM:2.77
706 A_ErmoMG_comp16548_c0_seq1
1059bp
PREDICTED:_epidermal_growth_factor_receptor_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
FPKM:2.34 TPM:1.72
707 A_ErmoMG_comp16548_c0_seq2
210bp
putative_epidermal_growth_factor_receptor_[Operophtera_brumata]
FPKM:2.34 TPM:1.72
708 A_ErmoMG_comp16550_c0_seq1
318bp
FPKM:1.05 TPM:0.77
709 A_ErmoMG_comp16551_c0_seq1
380bp
CRISPR-associated_helicase/endonuclease_Cas3_[Selenomonas_sp._FOBRC6]
FPKM:4.37 TPM:3.21
710 A_ErmoMG_comp165521_c0_seq1
1581bp
FPKM:3.51 TPM:2.58
711 A_ErmoMG_comp16553_c0_seq1
392bp
Stress-activated_map_kinase-interacting_protein_1,_partial_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0031932 C TORC2 complex
FPKM:3.27 TPM:2.40
712 A_ErmoMG_comp16555_c0_seq1
422bp
FPKM:1.46 TPM:1.07
713 A_ErmoMG_comp16558_c0_seq1
329bp
FPKM:3.57 TPM:2.63
714 A_ErmoMG_comp16560_c0_seq1
764bp
FPKM:0.95 TPM:0.70
715 A_ErmoMG_comp16560_c0_seq2
658bp
FPKM:2.32 TPM:1.70
716 A_ErmoMG_comp16561_c0_seq1
330bp
FPKM:1.54 TPM:1.13
717 A_ErmoMG_comp16561_c0_seq2
966bp
PREDICTED:_uncharacterized_protein_LOC106130150_[Amyelois_transitella]
FPKM:2.27 TPM:1.67
718 A_ErmoMG_comp16562_c0_seq1
708bp
UPF0474_protein_[Operophtera_brumata]
FPKM:2.76 TPM:2.03
719 A_ErmoMG_comp16562_c1_seq1
754bp
PREDICTED:_uncharacterized_protein_LOC106137277_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0003700 F DNA-binding transcription factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0038202 P TORC1 signaling
GO:0042594 P response to starvation
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0044246 P regulation of metabolic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046982 F protein heterodimerization activity
FPKM:2.25 TPM:1.66
720 A_ErmoMG_comp16563_c0_seq1
284bp
PREDICTED:_uncharacterized_protein_LOC105390664_[Plutella_xylostella]
FPKM:0.00 TPM:0.00
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