SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/38954
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1501 A_ErmoMG_comp174075_c0_seq1
242bp
FPKM:3.68 TPM:2.71
1502 A_ErmoMG_comp17407_c0_seq1
206bp
PREDICTED:_DENN_domain-containing_protein_1B-like_isoform_X1_[Bombyx_mori]
FPKM:5.08 TPM:3.74
1503 A_ErmoMG_comp17408_c0_seq1
253bp
hypothetical_protein_ASPCAL07973_[Aspergillus_calidoustus]
FPKM:3.99 TPM:2.93
1504 A_ErmoMG_comp17409_c0_seq1
294bp
FPKM:2.92 TPM:2.15
1505 A_ErmoMG_comp174100_c0_seq1
564bp
FPKM:4.14 TPM:3.05
1506 A_ErmoMG_comp174105_c0_seq1
980bp
PREDICTED:_proline-rich_protein_11-like_[Amyelois_transitella]
FPKM:3.02 TPM:2.22
1507 A_ErmoMG_comp174106_c0_seq1
378bp
hypothetical_protein_[Pseudomonas_sp._ABAC61]
FPKM:4.88 TPM:3.59
1508 A_ErmoMG_comp17412_c0_seq1
206bp
FPKM:4.52 TPM:3.32
1509 A_ErmoMG_comp174132_c0_seq1
210bp
FPKM:2.13 TPM:1.57
1510 A_ErmoMG_comp174137_c0_seq1
882bp
fibroin-modulator-binding_protein-1_[Bombyx_mori]
FPKM:4.33 TPM:3.19
1511 A_ErmoMG_comp17413_c0_seq1
257bp
FPKM:4.17 TPM:3.07
1512 A_ErmoMG_comp174145_c0_seq1
437bp
FPKM:3.78 TPM:2.78
1513 A_ErmoMG_comp174157_c0_seq1
532bp
hypothetical_protein_PV06_01800_[Exophiala_oligosperma]
FPKM:5.63 TPM:4.14
1514 A_ErmoMG_comp17415_c0_seq1
740bp
PREDICTED:_NF-X1-type_zinc_finger_protein_NFXL1,_partial_[Bombyx_mori]
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
FPKM:2.80 TPM:2.06
1515 A_ErmoMG_comp17415_c1_seq1
334bp
Nuclear_transcription_factor_[Operophtera_brumata]
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
FPKM:2.90 TPM:2.13
1516 A_ErmoMG_comp17416_c0_seq1
303bp
Uncharacterized_protein_OBRU01_02241_[Operophtera_brumata]
FPKM:2.07 TPM:1.52
1517 A_ErmoMG_comp17417_c0_seq1
243bp
hypothetical_protein_AURDEDRAFT_164547_[Auricularia_subglabra_TFB-10046_SS5]
FPKM:4.37 TPM:3.22
1518 A_ErmoMG_comp17418_c0_seq1
689bp
FPKM:1.97 TPM:1.45
1519 A_ErmoMG_comp17418_c1_seq1
433bp
FPKM:2.56 TPM:1.88
1520 A_ErmoMG_comp17419_c0_seq1
246bp
PREDICTED:_inorganic_phosphate_co-transporter_isoform_X1_[Bombyx_mori]
FPKM:0.71 TPM:0.52
1521 A_ErmoMG_comp17420_c0_seq1
739bp
PREDICTED:_probable_18S_rRNA_(guanine-N(7))-methyltransferase_isoform_X1_[Amyelois_transitella]
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
FPKM:1.68 TPM:1.24
1522 A_ErmoMG_comp174213_c0_seq1
317bp
conserved_hypothetical_protein_[Coccidioides_posadasii_str._Silveira]
FPKM:3.18 TPM:2.34
1523 A_ErmoMG_comp17421_c0_seq1
213bp
FPKM:3.59 TPM:2.64
1524 A_ErmoMG_comp174224_c0_seq1
1009bp
PREDICTED:_four_and_a_half_LIM_domains_protein_2_isoform_X2_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:3.22 TPM:2.37
1525 A_ErmoMG_comp17423_c0_seq1
235bp
PREDICTED:_pecanex-like_protein_1_[Bombyx_mori]
FPKM:3.16 TPM:2.32
1526 A_ErmoMG_comp174241_c0_seq1
901bp
PREDICTED:_nuclear_pore_complex_protein_Nup153-like_[Bombyx_mori]
FPKM:2.99 TPM:2.20
1527 A_ErmoMG_comp17426_c0_seq1
398bp
antennal_period_protein_[Spodoptera_littoralis]
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0048511 P rhythmic process
FPKM:1.74 TPM:1.28
1528 A_ErmoMG_comp17427_c0_seq1
332bp
FPKM:2.15 TPM:1.58
1529 A_ErmoMG_comp17428_c0_seq1
427bp
PREDICTED:_uncharacterized_protein_LOC101747207_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0007414 P axonal defasciculation
GO:0007415 P defasciculation of motor neuron axon
GO:0008045 P motor neuron axon guidance
GO:0010906 P regulation of glucose metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030424 C axon
GO:0035335 P peptidyl-tyrosine dephosphorylation
FPKM:2.87 TPM:2.11
1530 A_ErmoMG_comp17429_c0_seq1
398bp
PREDICTED:_uncharacterized_protein_LOC106143196_[Amyelois_transitella]
GO:0005615 C extracellular space
FPKM:2.18 TPM:1.60
previous next from show/38954

- SilkBase 1999-2023 -