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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1531 A_ErmoMG_comp17431_c0_seq1
341bp
PREDICTED:_RB1-inducible_coiled-coil_protein_1_isoform_X2_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0001889 P liver development
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007254 P JNK cascade
GO:0007507 P heart development
GO:0010506 P regulation of autophagy
GO:0019901 F protein kinase binding
GO:0031965 C nuclear membrane
GO:0034045 C phagophore assembly site membrane
GO:0043066 P negative regulation of apoptotic process
GO:0045793 P positive regulation of cell size
GO:1990316 C Atg1/ULK1 kinase complex
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:2.24 TPM:1.65
1532 A_ErmoMG_comp17433_c0_seq1
224bp
toluene_tolerance_protein_[Acinetobacter_soli]
FPKM:4.46 TPM:3.28
1533 A_ErmoMG_comp17434_c0_seq1
702bp
PREDICTED:_claspin_homolog,_partial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0033314 P mitotic DNA replication checkpoint signaling
FPKM:1.66 TPM:1.22
1534 A_ErmoMG_comp17435_c0_seq1
419bp
PREDICTED:_homeobox_protein_cut_isoform_X6_[Bombyx_mori]
FPKM:2.15 TPM:1.58
1535 A_ErmoMG_comp17436_c0_seq1
300bp
PREDICTED:_L-asparaginase-like_[Papilio_polytes]
GO:0004067 F asparaginase activity
GO:0005575 C cellular_component
GO:0006520 P cellular amino acid metabolic process
GO:0006528 P asparagine metabolic process
GO:0016787 F hydrolase activity
FPKM:2.11 TPM:1.55
1536 A_ErmoMG_comp17437_c0_seq1
704bp
PREDICTED:_WD_repeat-containing_protein_46_[Papilio_xuthus]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
GO:1903955 P positive regulation of protein targeting to mitochondrion
FPKM:1.66 TPM:1.22
1537 A_ErmoMG_comp17438_c0_seq1
324bp
PREDICTED:_lactosylceramide_4-alpha-galactosyltransferase-like,_partial_[Bombyx_mori]
FPKM:2.44 TPM:1.80
1538 A_ErmoMG_comp174393_c0_seq1
623bp
PREDICTED:_LOW_QUALITY_PROTEIN:_protein_split_ends_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007400 P neuroblast fate determination
GO:0007403 P glial cell fate determination
GO:0007411 P axon guidance
GO:0007422 P peripheral nervous system development
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035222 P wing disc pattern formation
GO:0035321 P maintenance of imaginal disc-derived wing hair orientation
GO:0048106 P establishment of thoracic bristle planar orientation
GO:0048749 P compound eye development
GO:0050832 P defense response to fungus
FPKM:3.10 TPM:2.28
1539 A_ErmoMG_comp17439_c0_seq1
465bp
PREDICTED:_AT-rich_interactive_domain-containing_protein_2-like_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006337 P nucleosome disassembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0046872 F metal ion binding
GO:0090544 C SWI/SNF superfamily-type complex
FPKM:1.61 TPM:1.19
1540 A_ErmoMG_comp17440_c0_seq1
1162bp
transposable_element_tcb1_transposase_[Lasius_niger]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
FPKM:1.72 TPM:1.26
1541 A_ErmoMG_comp17442_c0_seq1
515bp
membrane_protein_[Cryptococcus_gattii_IND107]
FPKM:3.19 TPM:2.35
1542 A_ErmoMG_comp17443_c0_seq1
420bp
FPKM:2.14 TPM:1.57
1543 A_ErmoMG_comp17447_c0_seq1
234bp
FPKM:5.18 TPM:3.81
1544 A_ErmoMG_comp174484_c0_seq1
1076bp
Bem46-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:3.23 TPM:2.38
1545 A_ErmoMG_comp174488_c0_seq1
263bp
FPKM:6.10 TPM:4.49
1546 A_ErmoMG_comp17448_c0_seq1
649bp
PREDICTED:_bifunctional_methylenetetrahydrofolate_dehydrogenase/cyclohydrolase,_mitochondrial_isoform_X2_[Plutella_xylostella]
GO:0000105 P histidine biosynthetic process
GO:0003824 F catalytic activity
GO:0004329 F formate-tetrahydrofolate ligase activity
GO:0004477 F methenyltetrahydrofolate cyclohydrolase activity
GO:0004487 F methylenetetrahydrofolate dehydrogenase (NAD+) activity
GO:0004488 F methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006164 P purine nucleotide biosynthetic process
GO:0006730 P one-carbon metabolic process
GO:0008152 P metabolic process
GO:0008652 P cellular amino acid biosynthetic process
GO:0009086 P methionine biosynthetic process
GO:0009256 P 10-formyltetrahydrofolate metabolic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016787 F hydrolase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0046655 P folic acid metabolic process
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.98 TPM:1.46
1547 A_ErmoMG_comp17450_c0_seq1
935bp
PREDICTED:_transformation/transcription_domain-associated_protein_[Bombyx_mori]
GO:0000125 C SAGA complex
GO:0000812 C Swr1 complex
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005794 C Golgi apparatus
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016578 P histone deubiquitination
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030914 C SAGA complex
GO:0033276 C transcription factor TFTC complex
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:1904837 P beta-catenin-TCF complex assembly
FPKM:2.26 TPM:1.66
1548 A_ErmoMG_comp17452_c0_seq1
368bp
hypothetical_protein_KGM_15639_[Danaus_plexippus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0044822 F RNA binding
FPKM:2.60 TPM:1.91
1549 A_ErmoMG_comp17452_c0_seq2
591bp
RNA-binding_protein_12_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0044822 F RNA binding
FPKM:2.17 TPM:1.60
1550 A_ErmoMG_comp17453_c0_seq1
308bp
PREDICTED:_uncharacterized_protein_LOC101745877_isoform_X1_[Bombyx_mori]
FPKM:2.68 TPM:1.97
1551 A_ErmoMG_comp17454_c0_seq1
205bp
thymidylate_synthase_isoform_2_[Bombyx_mori]
GO:0004799 F thymidylate synthase activity
GO:0005737 C cytoplasm
GO:0006231 P dTMP biosynthetic process
GO:0006235 P dTTP biosynthetic process
GO:0008168 F methyltransferase activity
GO:0009165 P nucleotide biosynthetic process
GO:0016740 F transferase activity
GO:0032259 P methylation
FPKM:5.73 TPM:4.22
1552 A_ErmoMG_comp174559_c0_seq1
374bp
putative_cop9_signalosome_complex_subunit_[Danaus_plexippus]
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006909 P phagocytosis
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0008180 C COP9 signalosome
GO:0008231 C repressor ecdysone receptor complex
GO:0010388 P protein deneddylation
GO:0016922 F nuclear receptor binding
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0035257 F nuclear receptor binding
GO:0036099 P female germ-line stem cell population maintenance
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048140 P male germ-line cyst encapsulation
GO:0048142 P germarium-derived cystoblast division
GO:0048477 P oogenesis
GO:0050821 P protein stabilization
GO:0051726 P regulation of cell cycle
FPKM:4.48 TPM:3.30
1553 A_ErmoMG_comp17455_c0_seq1
284bp
FPKM:2.86 TPM:2.11
1554 A_ErmoMG_comp174579_c0_seq1
244bp
FPKM:1.08 TPM:0.80
1555 A_ErmoMG_comp17457_c0_seq1
284bp
PREDICTED:_uncharacterized_protein_LOC101743057_[Bombyx_mori]
FPKM:2.86 TPM:2.11
1556 A_ErmoMG_comp174580_c0_seq1
566bp
FPKM:4.74 TPM:3.49
1557 A_ErmoMG_comp17460_c0_seq1
231bp
PREDICTED:_neuralized-like_protein_4_[Bombyx_mori]
FPKM:2.47 TPM:1.82
1558 A_ErmoMG_comp174610_c0_seq1
325bp
FPKM:2.84 TPM:2.09
1559 A_ErmoMG_comp17462_c0_seq1
681bp
replication_factor_C_subunit_2_[Bombyx_mori]
GO:0000076 P DNA replication checkpoint signaling
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000819 P sister chromatid segregation
GO:0003677 F DNA binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005663 C DNA replication factor C complex
GO:0005875 C microtubule associated complex
GO:0006260 P DNA replication
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0006281 P DNA repair
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0016321 P female meiosis chromosome segregation
GO:0022008 P neurogenesis
GO:0046331 P lateral inhibition
FPKM:1.93 TPM:1.42
1560 A_ErmoMG_comp17464_c0_seq1
430bp
FPKM:2.97 TPM:2.18
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