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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

1201

A_ErmoMG_comp17068_c0_seq1

1094bp

PREDICTED:_hormone-sensitive_lipase_[Bombyx_mori]

GO:0005515	F	protein binding
GO:0005615	C	extracellular space
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005739	C	mitochondrion
GO:0005811	C	lipid droplet
GO:0005829	C	cytosol
GO:0005886	C	plasma membrane
GO:0005901	C	caveola
GO:0006361	P	transcription initiation from RNA polymerase I promoter
GO:0006363	P	termination of RNA polymerase I transcription
GO:0006629	P	lipid metabolic process
GO:0007565	P	female pregnancy
GO:0008152	P	metabolic process
GO:0008202	P	steroid metabolic process
GO:0008203	P	cholesterol metabolic process
GO:0016020	C	membrane
GO:0016042	P	lipid catabolic process
GO:0016298	F	lipase activity
GO:0016787	F	hydrolase activity
GO:0016788	F	hydrolase activity, acting on ester bonds
GO:0019433	P	triglyceride catabolic process
GO:0033878	F	hormone-sensitive lipase activity
GO:0042134	F	rRNA primary transcript binding
GO:0042493	P	response to xenobiotic stimulus
GO:0047372	F	acylglycerol lipase activity

FPKM:4.15 TPM:3.05

1202

A_ErmoMG_comp17069_c0_seq1

411bp

putative_polyketide_synthase_[Fusarium_poae]

FPKM:2.49 TPM:1.83

1203

A_ErmoMG_comp17070_c0_seq1

254bp

FPKM:5.60 TPM:4.12

1204

A_ErmoMG_comp17071_c0_seq1

303bp

PREDICTED:_arf-GAP_with_dual_PH_domain-containing_protein_1-like_isoform_X2_[Bombyx_mori]

GO:0005096	F	GTPase activator activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005886	C	plasma membrane
GO:0007166	P	cell surface receptor signaling pathway
GO:0043087	P	regulation of GTPase activity
GO:0043533	F	inositol 1,3,4,5 tetrakisphosphate binding
GO:0043547	P	positive regulation of GTPase activity
GO:0046872	F	metal ion binding

FPKM:3.22 TPM:2.37

1205

A_ErmoMG_comp17072_c0_seq1

953bp

PREDICTED:_X-ray_repair_cross-complementing_protein_5-like_[Plutella_xylostella]

GO:0000166	F	nucleotide binding
GO:0000723	P	telomere maintenance
GO:0000783	C	nuclear telomere cap complex
GO:0000784	C	chromosome, telomeric region
GO:0003677	F	DNA binding
GO:0003684	F	damaged DNA binding
GO:0003690	F	double-stranded DNA binding
GO:0003691	F	double-stranded telomeric DNA binding
GO:0004003	F	DNA helicase activity
GO:0004386	F	helicase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005694	C	chromosome
GO:0005730	C	nucleolus
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0005886	C	plasma membrane
GO:0006281	P	DNA repair
GO:0006302	P	double-strand break repair
GO:0006303	P	double-strand break repair via nonhomologous end joining
GO:0006310	P	DNA recombination
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006974	P	cellular response to DNA damage stimulus
GO:0008022	F	protein C-terminus binding
GO:0008283	P	cell population proliferation
GO:0016020	C	membrane
GO:0016787	F	hydrolase activity
GO:0016817	F	hydrolase activity, acting on acid anhydrides
GO:0031625	F	ubiquitin protein ligase binding
GO:0032481	P	positive regulation of type I interferon production
GO:0032508	P	DNA duplex unwinding
GO:0042162	F	telomeric DNA binding
GO:0043564	C	Ku70:Ku80 complex
GO:0044212	F	transcription cis-regulatory region binding
GO:0044822	F	RNA binding
GO:0044877	F	protein-containing complex binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0048660	P	regulation of smooth muscle cell proliferation
GO:0050769	P	positive regulation of neurogenesis
GO:0051575	F	5'-deoxyribose-5-phosphate lyase activity
GO:0060218	P	hematopoietic stem cell differentiation
GO:0070419	C	nonhomologous end joining complex
GO:0071480	P	cellular response to gamma radiation
GO:0071481	P	cellular response to X-ray
GO:0075713	P	establishment of integrated proviral latency
GO:1904430	P	negative regulation of t-circle formation

FPKM:2.53 TPM:1.86

1206

A_ErmoMG_comp17073_c0_seq1

1216bp

PREDICTED:_structural_maintenance_of_chromosomes_protein_2_[Amyelois_transitella]

GO:0000166	F	nucleotide binding
GO:0000796	C	condensin complex
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005694	C	chromosome
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0007049	P	cell cycle
GO:0007067	P	mitotic cell cycle
GO:0007076	P	mitotic chromosome condensation
GO:0030261	P	chromosome condensation
GO:0051276	P	chromosome organization
GO:0051301	P	cell division

FPKM:2.88 TPM:2.12

1207

A_ErmoMG_comp17074_c0_seq1

265bp

PREDICTED:_protein_AF-10_isoform_X9_[Bombyx_mori]

FPKM:1.17 TPM:0.86

1208

A_ErmoMG_comp17074_c0_seq2

307bp

PREDICTED:_protein_AF-10_isoform_X9_[Bombyx_mori]

FPKM:3.62 TPM:2.66

1209

A_ErmoMG_comp17075_c0_seq1

471bp

FPKM:3.73 TPM:2.74

1210

A_ErmoMG_comp17076_c0_seq1

413bp

PREDICTED:_uncharacterized_protein_LOC101745326_isoform_X3_[Bombyx_mori]

FPKM:3.70 TPM:2.72

1211

A_ErmoMG_comp17078_c0_seq1

1015bp

SUMO-1_activating_enzyme_[Bombyx_mori]

GO:0005634	C	nucleus
GO:0005829	C	cytosol
GO:0006464	P	cellular protein modification process
GO:0007346	P	regulation of mitotic cell cycle
GO:0008022	F	protein C-terminus binding
GO:0008641	F	ubiquitin-like modifier activating enzyme activity
GO:0016874	F	ligase activity
GO:0016925	P	protein sumoylation
GO:0019948	F	SUMO activating enzyme activity

FPKM:2.95 TPM:2.17

1212

A_ErmoMG_comp17080_c0_seq1

400bp

FPKM:3.60 TPM:2.65

1213

A_ErmoMG_comp17082_c0_seq1

297bp

GMCbeta2_[Operophtera_brumata]

GO:0004344	F	glucose dehydrogenase activity
GO:0005576	C	extracellular region
GO:0006006	P	glucose metabolic process
GO:0008364	P	pupal chitin-based cuticle development
GO:0016491	F	oxidoreductase activity
GO:0016614	F	oxidoreductase activity, acting on CH-OH group of donors
GO:0019233	P	sensory perception of pain
GO:0042335	P	cuticle development
GO:0046693	P	sperm storage
GO:0050660	F	flavin adenine dinucleotide binding
GO:0055114	P	obsolete oxidation-reduction process

FPKM:4.06 TPM:2.99

1214

A_ErmoMG_comp17082_c0_seq2

260bp

glucose_dehydrogenase_[FAD,_quinone]-like_[Bombyx_mori]

FPKM:0.00 TPM:0.00

1215

A_ErmoMG_comp17082_c0_seq3

258bp

glucose_dehydrogenase_[FAD,_quinone]-like_[Bombyx_mori]

GO:0005576	C	extracellular region
GO:0016491	F	oxidoreductase activity
GO:0016614	F	oxidoreductase activity, acting on CH-OH group of donors
GO:0050660	F	flavin adenine dinucleotide binding
GO:0055114	P	obsolete oxidation-reduction process

FPKM:3.18 TPM:2.34

1216

A_ErmoMG_comp17085_c0_seq1

476bp

FPKM:2.56 TPM:1.88

1217

A_ErmoMG_comp17086_c0_seq1

858bp

PREDICTED:_poly(A)_RNA_polymerase,_mitochondrial_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0000287	F	magnesium ion binding
GO:0002134	F	UTP binding
GO:0003723	F	RNA binding
GO:0004652	F	polynucleotide adenylyltransferase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0005739	C	mitochondrion
GO:0006351	P	transcription, DNA-templated
GO:0006378	P	mRNA polyadenylation
GO:0006397	P	mRNA processing
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity
GO:0030145	F	manganese ion binding
GO:0042802	F	identical protein binding
GO:0042803	F	protein homodimerization activity
GO:0043231	C	intracellular membrane-bounded organelle
GO:0044822	F	RNA binding
GO:0046872	F	metal ion binding
GO:0071044	P	histone mRNA catabolic process

FPKM:2.24 TPM:1.65

1218

A_ErmoMG_comp17088_c0_seq1

1221bp

hypothetical_protein_KGM_14811_[Danaus_plexippus]

GO:0000166	F	nucleotide binding
GO:0000287	F	magnesium ion binding
GO:0001816	P	cytokine production
GO:0002376	P	immune system process
GO:0002446	P	neutrophil mediated immunity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005149	F	interleukin-1 receptor binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0006468	P	protein phosphorylation
GO:0007165	P	signal transduction
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0019221	P	cytokine-mediated signaling pathway
GO:0035556	P	intracellular signal transduction
GO:0043123	P	positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045087	P	innate immune response
GO:1990266	P	neutrophil migration

FPKM:2.35 TPM:1.73

1219

A_ErmoMG_comp17090_c0_seq1

2011bp

PREDICTED:_disintegrin_and_metalloproteinase_domain-containing_protein_12_[Bombyx_mori]

GO:0004222	F	metalloendopeptidase activity
GO:0005515	F	protein binding
GO:0005654	C	nucleoplasm
GO:0005739	C	mitochondrion
GO:0005886	C	plasma membrane
GO:0006508	P	proteolysis
GO:0007155	P	cell adhesion
GO:0007173	P	epidermal growth factor receptor signaling pathway
GO:0008233	F	peptidase activity
GO:0008237	F	metallopeptidase activity
GO:0008270	F	zinc ion binding
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016787	F	hydrolase activity
GO:0017124	F	SH3 domain binding
GO:0046872	F	metal ion binding

FPKM:1.58 TPM:1.16

1220

A_ErmoMG_comp170911_c0_seq1

292bp

cRISPR-associated_endoribonuclease_Cas2_2_[Clostridium_sp._CAG:632]

FPKM:6.41 TPM:4.72

1221

A_ErmoMG_comp17091_c0_seq1

1076bp

PREDICTED:_vam6/Vps39-like_protein_[Amyelois_transitella]

GO:0005737	C	cytoplasm
GO:0005764	C	lysosome
GO:0005765	C	lysosomal membrane
GO:0005768	C	endosome
GO:0005770	C	late endosome
GO:0006810	P	transport
GO:0006886	P	intracellular protein transport
GO:0006914	P	autophagy
GO:0008333	P	endosome to lysosome transport
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0016192	P	vesicle-mediated transport
GO:0030123	C	AP-3 adaptor complex
GO:0030897	C	HOPS complex
GO:0031902	C	late endosome membrane
GO:0034058	P	endosomal vesicle fusion
GO:0097576	P	vacuole fusion
GO:1902774	P	late endosome to lysosome transport
GO:1990126	P	endocytic recycling

FPKM:2.99 TPM:2.20

1222

A_ErmoMG_comp17091_c1_seq1

622bp

FPKM:2.17 TPM:1.60

1223

A_ErmoMG_comp170937_c0_seq1

467bp

PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_30_homolog,_partial_[Papilio_xuthus]

GO:0004843	F	thiol-dependent deubiquitinase
GO:0005575	C	cellular_component
GO:0005739	C	mitochondrion
GO:0005741	C	mitochondrial outer membrane
GO:0006508	P	proteolysis
GO:0006511	P	ubiquitin-dependent protein catabolic process
GO:0008233	F	peptidase activity
GO:0008234	F	cysteine-type peptidase activity
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016579	P	protein deubiquitination
GO:0016787	F	hydrolase activity
GO:0035871	P	protein K11-linked deubiquitination
GO:0036459	F	thiol-dependent deubiquitinase
GO:0044313	P	protein K6-linked deubiquitination
GO:1901562	P	response to paraquat