SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_ErmoMG_comp17086_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_poly(A)_RNA_polymerase,_mitochondrial_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0002134 F UTP binding
GO:0003723 F RNA binding
GO:0004652 F polynucleotide adenylyltransferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0030145 F manganese ion binding
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0071044 P histone mRNA catabolic process
Transcript
Level		FPKM:2.24 TPM:1.65
ORF EntryO_ErmoMG364_5prime_partial:A_ErmoMG_comp17086_c0_seq1
Sequence
(Nucleotide)
CTGGCTGTTCGGTTCCTTGGACCCGCGCGTGCGACCGCTGACTTTCGTAATCCGTCGCTG
GGCGCAGACAGTGGGGCTGACCAACCATCACCCAGGACGGTGGATCACTAACTTCCCCCT
CACCTTGATGGTGCTGTTCTTCCTGCAGCAGAACGGCAAAGATGGGGTTGTGTTACCGTC
CTTGAAGACTCTTGTTAGTAGTGCAGGTAAAGAAGATGTAAGATTAGCAGAAGAGAATAT
AAACTGTACATTCCTCAGAGACATGAACAAATTACCGAAAGACACGTACGGACAAAATCA
AGCTAATATAGAAACGTTATTACTACAGTTTTTCGAGTTCTACGCACAATTCGAATTCCA
CGACAAAGCTATATCGATCAACGAAGGTGTTCCTATACGAAAACCTAATAACCTACCGCT
ATACATAGTGAATCCTTTAGAACCCGCACTAAATGTGAGCAGAAATGTTAGTTACGAAGA
GTGTGAGAGGTTGAAACTAGAAGCGAAGAACGCCGCGTGGCTGTTAGACTCTAGTTTAGA
CGGAAAACGAACTGATAGTTGGGGAATTTTAGGTCTGATTGAAAGAAAAAGTACTAGGGG
ACTGAAAAATTTACTTAAAGTTGGTAATTCTCAGAGACTCGTCTCAGTCAAAGATTTGTT
CAATGATGACGATAAACATGTTCAAGATAAGAAGTTGGTCAGTGGAAATGAAATAAAACA
GGAGAAACCAAAGGAAAAATTGAAATTCAAGAACACGCAGATCGCGAGCGAAGTTAATAG
GATACGACGGGATAAAATTATATGAGACTGATTTGTAGAAGTATTTTGTAAATAAGTGTT
TGTGAAATTAACGTGTAA
(858 bp)

- SilkBase 1999-2023 -