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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1231 A_ErmoMG_comp17099_c0_seq1
770bp
PREDICTED:_histone-lysine_N-methyltransferase,_H3_lysine-79_specific_isoform_X7_[Bombyx_mori]
GO:0000781 C chromosome, telomeric region
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006348 P subtelomeric heterochromatin assembly
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030702 P pericentric heterochromatin assembly
GO:0031151 F histone methyltransferase activity (H3-K79 specific)
GO:0032259 P methylation
GO:0034729 P histone H3-K79 methylation
GO:0035097 C histone methyltransferase complex
GO:0046331 P lateral inhibition
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0051726 P regulation of cell cycle
GO:2000637 P positive regulation of gene silencing by miRNA
FPKM:2.37 TPM:1.75
1232 A_ErmoMG_comp17101_c0_seq1
295bp
putative_FeS_assembly_protein_SufD_[Candidatus_Sulcia_muelleri_CARI]
FPKM:1.21 TPM:0.89
1233 A_ErmoMG_comp17101_c1_seq1
497bp
FPKM:2.93 TPM:2.16
1234 A_ErmoMG_comp17103_c0_seq1
742bp
PREDICTED:_uncharacterized_protein_LOC101737006_isoform_X1_[Bombyx_mori]
FPKM:2.98 TPM:2.19
1235 A_ErmoMG_comp17104_c0_seq1
548bp
peptide_ABC_transporter_substrate-binding_protein_[Clostridium_botulinum]
FPKM:3.02 TPM:2.22
1236 A_ErmoMG_comp17107_c0_seq1
531bp
PREDICTED:_uncharacterized_protein_LOC106136115_[Amyelois_transitella]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
FPKM:3.44 TPM:2.53
1237 A_ErmoMG_comp17109_c0_seq1
1369bp
PREDICTED:_DNA_repair_protein_RAD50_[Bombyx_mori]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000166 F nucleotide binding
GO:0000722 P telomere maintenance via recombination
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0000790 C chromatin
GO:0000793 C condensed chromosome
GO:0000794 C condensed nuclear chromosome
GO:0002168 P instar larval development
GO:0003690 F double-stranded DNA binding
GO:0003691 F double-stranded telomeric DNA binding
GO:0004003 F DNA helicase activity
GO:0004017 F adenylate kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007004 P telomere maintenance via telomerase
GO:0007049 P cell cycle
GO:0007131 P reciprocal meiotic recombination
GO:0008104 P protein localization
GO:0008408 F 3'-5' exonuclease activity
GO:0016233 P telomere capping
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0030870 C Mre11 complex
GO:0032508 P DNA duplex unwinding
GO:0035861 C site of double-strand break
GO:0043047 F single-stranded telomeric DNA binding
GO:0046872 F metal ion binding
GO:0046939 P nucleotide phosphorylation
GO:0051276 P chromosome organization
GO:0051321 P meiotic cell cycle
GO:0051880 F G-quadruplex DNA binding
GO:0070192 P chromosome organization involved in meiotic cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.28 TPM:1.68
1238 A_ErmoMG_comp17110_c0_seq1
211bp
FPKM:6.32 TPM:4.65
1239 A_ErmoMG_comp17111_c0_seq1
265bp
PREDICTED:_general_transcription_factor_IIH_subunit_3-like,_partial_[Plutella_xylostella]
GO:0000439 C transcription factor TFIIH core complex
GO:0003684 F damaged DNA binding
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006412 P translation
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008135 F translation factor activity, RNA binding
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0046872 F metal ion binding
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
FPKM:5.40 TPM:3.98
1240 A_ErmoMG_comp17112_c0_seq1
1525bp
PREDICTED:_HEAT_repeat-containing_protein_5B_[Bombyx_mori]
GO:0005515 F protein binding
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0070062 C extracellular exosome
FPKM:0.94 TPM:0.69
1241 A_ErmoMG_comp17112_c0_seq2
1555bp
PREDICTED:_HEAT_repeat-containing_protein_5B_[Bombyx_mori]
GO:0005515 F protein binding
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0070062 C extracellular exosome
FPKM:1.41 TPM:1.03
1242 A_ErmoMG_comp17113_c0_seq1
225bp
FPKM:5.29 TPM:3.89
1243 A_ErmoMG_comp171147_c0_seq1
402bp
FPKM:3.71 TPM:2.73
1244 A_ErmoMG_comp17115_c0_seq1
589bp
PREDICTED:_uncharacterized_protein_LOC101738091_isoform_X1_[Bombyx_mori]
FPKM:2.08 TPM:1.53
1245 A_ErmoMG_comp17116_c0_seq1
396bp
FPKM:4.39 TPM:3.23
1246 A_ErmoMG_comp17117_c0_seq1
834bp
PREDICTED:_TBC_domain-containing_protein_kinase-like_protein_[Amyelois_transitella]
GO:0004672 F protein kinase activity
GO:0005096 F GTPase activator activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006468 P protein phosphorylation
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
FPKM:2.69 TPM:1.98
1247 A_ErmoMG_comp17121_c0_seq1
481bp
heat_shock_factor-a2_[Bombyx_mori]
FPKM:2.96 TPM:2.18
1248 A_ErmoMG_comp17121_c1_seq1
538bp
PREDICTED:_heat_shock_factor-d_isoform_X5_[Bombyx_mori]
FPKM:2.82 TPM:2.07
1249 A_ErmoMG_comp17122_c0_seq1
221bp
FPKM:2.78 TPM:2.04
1250 A_ErmoMG_comp17123_c0_seq1
610bp
FPKM:2.94 TPM:2.16
1251 A_ErmoMG_comp17125_c0_seq1
231bp
antibiotic_biosynthesis_monooxygenase_subfamily_[Roseburia_sp._CAG:45]
FPKM:2.89 TPM:2.12
1252 A_ErmoMG_comp17127_c0_seq1
1795bp
PREDICTED:_activating_transcription_factor_7-interacting_protein_1_[Papilio_machaon]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
FPKM:2.35 TPM:1.73
1253 A_ErmoMG_comp17128_c0_seq1
710bp
PREDICTED:_uncharacterized_protein_LOC106129209_[Amyelois_transitella]
FPKM:3.47 TPM:2.56
1254 A_ErmoMG_comp17129_c0_seq1
499bp
FPKM:2.08 TPM:1.53
1255 A_ErmoMG_comp17130_c0_seq1
539bp
crossover_junction_endodeoxyribonuclease_RuvA_[Mannheimia_varigena]
FPKM:4.03 TPM:2.96
1256 A_ErmoMG_comp17131_c0_seq1
221bp
PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:6.01 TPM:4.42
1257 A_ErmoMG_comp17133_c0_seq1
636bp
PREDICTED:_BTB/POZ_domain-containing_protein_9_isoform_X2_[Bombyx_mori]
GO:0007616 P long-term memory
GO:0008344 P adult locomotory behavior
GO:0042428 P serotonin metabolic process
GO:0042748 P circadian sleep/wake cycle, non-REM sleep
GO:0048512 P circadian behavior
GO:0050951 P sensory perception of temperature stimulus
GO:0060586 P multicellular organismal iron ion homeostasis
GO:1900242 P regulation of synaptic vesicle endocytosis
FPKM:3.16 TPM:2.33
1258 A_ErmoMG_comp17134_c0_seq1
321bp
FPKM:2.48 TPM:1.83
1259 A_ErmoMG_comp17135_c0_seq1
271bp
FPKM:4.01 TPM:2.95
1260 A_ErmoMG_comp171360_c0_seq1
668bp
FPKM:4.19 TPM:3.08
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