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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1141 A_ErmoMG_comp16997_c0_seq1
899bp
PREDICTED:_RNA_polymerase_II_transcription_factor_B_subunit_2_[Amyelois_transitella]
GO:0000439 C transcription factor TFIIH core complex
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004003 F DNA helicase activity
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0032508 P DNA duplex unwinding
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
FPKM:3.25 TPM:2.39
1142 A_ErmoMG_comp16998_c0_seq1
1078bp
Conserved_oligomeric_Golgi_complex_subunit_5_[Operophtera_brumata]
GO:0000139 C Golgi membrane
GO:0000916 P actomyosin contractile ring contraction
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007112 P male meiosis cytokinesis
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007290 P spermatid nucleus elongation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
GO:0030154 P cell differentiation
GO:0061024 P membrane organization
FPKM:3.19 TPM:2.35
1143 A_ErmoMG_comp16998_c0_seq2
1162bp
Conserved_oligomeric_Golgi_complex_subunit_5_[Operophtera_brumata]
GO:0000139 C Golgi membrane
GO:0000916 P actomyosin contractile ring contraction
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007112 P male meiosis cytokinesis
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007290 P spermatid nucleus elongation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
GO:0030154 P cell differentiation
GO:0061024 P membrane organization
FPKM:0.43 TPM:0.32
1144 A_ErmoMG_comp16999_c0_seq1
963bp
FPKM:2.63 TPM:1.94
1145 A_ErmoMG_comp17001_c0_seq1
1300bp
PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
FPKM:3.51 TPM:2.58
1146 A_ErmoMG_comp17002_c0_seq1
1126bp
Nucleosomal_histone_kinase_1_[Papilio_xuthus]
GO:0000070 P mitotic sister chromatid segregation
GO:0000166 F nucleotide binding
GO:0000785 C chromatin
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007126 P meiotic cell cycle
GO:0007130 P synaptonemal complex assembly
GO:0007143 P female meiotic nuclear division
GO:0008360 P regulation of cell shape
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016568 P chromatin organization
GO:0016572 P histone phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0022008 P neurogenesis
GO:0030717 P oocyte karyosome formation
GO:0035184 F histone threonine kinase activity
GO:0035405 P histone-threonine phosphorylation
GO:0036098 P male germ-line stem cell population maintenance
GO:0036099 P female germ-line stem cell population maintenance
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0097150 P neuronal stem cell population maintenance
GO:2001020 P regulation of response to DNA damage stimulus
FPKM:3.18 TPM:2.34
1147 A_ErmoMG_comp17003_c0_seq1
227bp
FPKM:8.19 TPM:6.03
1148 A_ErmoMG_comp17005_c0_seq1
272bp
FPKM:4.83 TPM:3.55
1149 A_ErmoMG_comp17006_c0_seq1
537bp
C-Myc-binding_protein_[Operophtera_brumata]
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
FPKM:2.92 TPM:2.15
1150 A_ErmoMG_comp17008_c0_seq1
337bp
FPKM:4.56 TPM:3.36
1151 A_ErmoMG_comp17009_c0_seq1
717bp
PREDICTED:_uncharacterized_protein_LOC105842356_[Bombyx_mori]
FPKM:2.78 TPM:2.05
1152 A_ErmoMG_comp170107_c0_seq1
575bp
PREDICTED:_trafficking_protein_particle_complex_subunit_2-like_protein_[Papilio_polytes]
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0048471 C perinuclear region of cytoplasm
FPKM:4.55 TPM:3.35
1153 A_ErmoMG_comp17010_c0_seq1
763bp
PREDICTED:_DENN_domain-containing_protein_1B-like_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0015031 P protein transport
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017137 F small GTPase binding
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0032456 P endocytic recycling
GO:0035745 P T-helper 2 cell cytokine production
GO:0043547 P positive regulation of GTPase activity
GO:0050776 P regulation of immune response
GO:0050852 P T cell receptor signaling pathway
FPKM:2.64 TPM:1.94
1154 A_ErmoMG_comp17011_c0_seq1
584bp
Serine/threonine-protein_phosphatase_4_catalytic_subunit_[Papilio_machaon]
GO:0004721 F phosphoprotein phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006470 P protein dephosphorylation
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:1.85 TPM:1.36
1155 A_ErmoMG_comp17012_c0_seq1
249bp
FPKM:1.43 TPM:1.05
1156 A_ErmoMG_comp17012_c0_seq2
255bp
FPKM:2.56 TPM:1.89
1157 A_ErmoMG_comp17013_c0_seq1
344bp
FPKM:3.12 TPM:2.30
1158 A_ErmoMG_comp17014_c0_seq1
310bp
FPKM:5.29 TPM:3.89
1159 A_ErmoMG_comp17015_c0_seq1
1511bp
PREDICTED:_activating_signal_cointegrator_1_[Papilio_xuthus]
GO:0002020 F protease binding
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0016922 F nuclear receptor binding
GO:0030331 F estrogen receptor binding
GO:0030520 P intracellular estrogen receptor signaling pathway
GO:0035035 F histone acetyltransferase binding
GO:0044389 F ubiquitin-like protein ligase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:1901998 P toxin transport
FPKM:3.46 TPM:2.54
1160 A_ErmoMG_comp17018_c0_seq1
348bp
FPKM:3.24 TPM:2.38
1161 A_ErmoMG_comp17019_c0_seq1
215bp
FPKM:3.49 TPM:2.57
1162 A_ErmoMG_comp170202_c0_seq1
1325bp
Uncharacterized_protein_OBRU01_09566_[Operophtera_brumata]
FPKM:2.33 TPM:1.72
1163 A_ErmoMG_comp17020_c0_seq1
592bp
FPKM:4.71 TPM:3.47
1164 A_ErmoMG_comp17024_c0_seq1
965bp
PREDICTED:_uncharacterized_protein_C17orf59_homolog_isoform_X1_[Bombyx_mori]
FPKM:2.94 TPM:2.17
1165 A_ErmoMG_comp17025_c0_seq1
305bp
FPKM:2.04 TPM:1.50
1166 A_ErmoMG_comp17026_c0_seq1
217bp
FPKM:0.97 TPM:0.72
1167 A_ErmoMG_comp17027_c0_seq1
743bp
FPKM:2.79 TPM:2.05
1168 A_ErmoMG_comp17028_c0_seq1
289bp
FPKM:6.04 TPM:4.44
1169 A_ErmoMG_comp17029_c0_seq1
664bp
Single-strand_selective_monofunctional_uracil_DNA_glycosylase_[Operophtera_brumata]
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0003677 F DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0017065 F single-strand selective uracil DNA N-glycosylase activity
GO:0019104 F DNA N-glycosylase activity
GO:0045008 P depyrimidination
FPKM:3.16 TPM:2.32
1170 A_ErmoMG_comp17029_c0_seq2
749bp
PREDICTED:_single-strand_selective_monofunctional_uracil_DNA_glycosylase_[Plutella_xylostella]
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0003677 F DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0017065 F single-strand selective uracil DNA N-glycosylase activity
GO:0019104 F DNA N-glycosylase activity
GO:0031981 C nuclear lumen
FPKM:0.60 TPM:0.44
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