SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
NameA_ErmoMG_comp17029_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)
Single-strand_selective_monofunctional_uracil_DNA_glycosylase_[Operophtera_brumata]
Ontology
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0003677 F DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0017065 F single-strand selective uracil DNA N-glycosylase activity
GO:0019104 F DNA N-glycosylase activity
GO:0045008 P depyrimidination
Transcript
Level
FPKM:3.16 TPM:2.32
ORF Entry
Sequence
(Nucleotide)
AAATAATGTTGTTTCTTCGTTTTTCGCGACAAGTGAAGAAAATATAAATAATAAGCGTGA
GACTATCGCCGAAAAGTTTCTGTTTCTGATTGATGAATTAAATGAGCAACTTGAAGACCT
CGTAATACCAGCCGCAATAAATTGCGTGTACAATCCTACTAAGTATGCACGGGAACCATT
CGAAACGTACCATTTGGTGAAATTTCATCAGTCAGAGATTGGTTGGGTATAAAAGGATTT
GTTGGCAAGCCTCCACAAGAAATTAAGTCTAGACCAATCACAGGATTCAATTGTAACAGA
ACTGAGGTCAGTGGAAAGCGTTTCTGGGGATTTTTCAGAAACCTATGTGGAGAACCACAG
AAGTTCTTTGAAACAAGTTTTGTGTATAATTATTTACCAGTACAATGGATGAAGAATAAT
GGATGTAATTTGACTCCTGGTGATTTTAAAGCAACAGAAATTGATCCTCTATACCACATA
TGTGATCCAATATTCAAAAAAGTGCTTGATCTGTATGATGTACACATCATCATAGCTGTT
GGAAAGTTTTGTGAGCTAAGAGCAAAAAAAGTCTTAGAAAAATATTCATTCCAAAATAAT
ATTCAGGTAGGCAAATTGTTCCACCGTCTAGGTTTTTTTATTGTATACAGGAGGAATTTT
TCAA
(664 bp)

- SilkBase 1999-2023 -