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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1111 A_ErmoMG_comp16970_c0_seq1
923bp
PREDICTED:_putative_ribosome-binding_factor_A,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0006364 P rRNA processing
FPKM:2.43 TPM:1.79
1112 A_ErmoMG_comp16971_c0_seq1
362bp
FPKM:2.02 TPM:1.49
1113 A_ErmoMG_comp16971_c1_seq1
596bp
FPKM:2.21 TPM:1.63
1114 A_ErmoMG_comp16972_c0_seq1
769bp
PREDICTED:_GPALPP_motifs-containing_protein_1_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.79 TPM:2.05
1115 A_ErmoMG_comp169731_c0_seq1
359bp
TKL_protein_kinase_[Salpingoeca_rosetta]
FPKM:7.52 TPM:5.54
1116 A_ErmoMG_comp16973_c0_seq1
321bp
FPKM:4.14 TPM:3.05
1117 A_ErmoMG_comp16973_c1_seq1
448bp
FPKM:3.76 TPM:2.77
1118 A_ErmoMG_comp169749_c0_seq1
362bp
FPKM:1.69 TPM:1.24
1119 A_ErmoMG_comp16974_c0_seq1
976bp
Collagen-like_protein_2_[Crassostrea_gigas]
FPKM:2.41 TPM:1.78
1120 A_ErmoMG_comp169767_c0_seq1
265bp
FPKM:5.10 TPM:3.75
1121 A_ErmoMG_comp16976_c0_seq1
914bp
FPKM:3.14 TPM:2.31
1122 A_ErmoMG_comp16977_c0_seq1
598bp
hypothetical_protein_RR46_07363_[Papilio_xuthus]
FPKM:3.75 TPM:2.76
1123 A_ErmoMG_comp16978_c0_seq1
605bp
FPKM:3.13 TPM:2.31
1124 A_ErmoMG_comp169817_c0_seq1
218bp
FPKM:3.36 TPM:2.47
1125 A_ErmoMG_comp16982_c0_seq1
1843bp
FPKM:2.37 TPM:1.74
1126 A_ErmoMG_comp16983_c0_seq1
615bp
FPKM:3.62 TPM:2.66
1127 A_ErmoMG_comp16984_c0_seq1
398bp
FPKM:3.92 TPM:2.88
1128 A_ErmoMG_comp16985_c0_seq1
627bp
FPKM:2.07 TPM:1.52
1129 A_ErmoMG_comp16987_c0_seq1
240bp
PREDICTED:_zinc_finger_protein_90-like_isoform_X2_[Bombyx_mori]
FPKM:5.25 TPM:3.87
1130 A_ErmoMG_comp16989_c0_seq1
310bp
FPKM:3.53 TPM:2.60
1131 A_ErmoMG_comp169907_c0_seq1
910bp
hypothetical_protein_KGM_03390_[Danaus_plexippus]
GO:0001104 F transcription coregulator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
FPKM:3.88 TPM:2.86
1132 A_ErmoMG_comp16991_c0_seq1
1008bp
PREDICTED:_periodic_tryptophan_protein_2_homolog_[Bombyx_mori]
GO:0000028 P ribosomal small subunit assembly
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0044822 F RNA binding
FPKM:2.84 TPM:2.09
1133 A_ErmoMG_comp169920_c0_seq1
828bp
FPKM:2.93 TPM:2.16
1134 A_ErmoMG_comp16992_c0_seq1
294bp
FPKM:3.90 TPM:2.87
1135 A_ErmoMG_comp16993_c0_seq1
1077bp
PREDICTED:_intron-binding_protein_aquarius_isoform_X3_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
FPKM:3.15 TPM:2.32
1136 A_ErmoMG_comp16994_c0_seq1
537bp
FPKM:2.83 TPM:2.08
1137 A_ErmoMG_comp169950_c0_seq1
1421bp
PREDICTED:_nuclear_nucleic_acid-binding_protein_C1D-like_[Amyelois_transitella]
GO:0000178 C exosome (RNase complex)
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
FPKM:3.15 TPM:2.32
1138 A_ErmoMG_comp16995_c0_seq1
326bp
FPKM:3.83 TPM:2.82
1139 A_ErmoMG_comp16996_c0_seq1
351bp
FPKM:3.37 TPM:2.48
1140 A_ErmoMG_comp169973_c0_seq1
321bp
FPKM:5.18 TPM:3.81
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