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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
91 A_BomoSK_comp100370_c0_seq1
1997bp
 PREDICTED:_tRNA-dihydrouridine(47)_synthase_[NAD(P)(+)]-like_[Amyelois_transitella]
GO:0002943 P tRNA dihydrouridine synthesis
GO:0003824 F catalytic activity
GO:0008033 P tRNA processing
GO:0016491 F oxidoreductase activity
GO:0017150 F tRNA dihydrouridine synthase activity
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:3.88 TPM:3.90
92 A_BomoSK_comp10037_c0_seq1
391bp
 hypothetical_protein_RR46_00687_[Papilio_xuthus]
FPKM:1.38 TPM:1.39
93 A_BomoSK_comp100381_c0_seq1
1828bp
 PREDICTED:_probable_arginine--tRNA_ligase,_mitochondrial_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004814 F arginine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006420 P arginyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0032543 P mitochondrial translation
GO:0044822 F RNA binding
FPKM:4.25 TPM:4.27
94 A_BomoSK_comp10038_c0_seq1
2431bp
FPKM:7.36 TPM:7.40
95 A_BomoSK_comp100395_c0_seq1
1496bp
 PREDICTED:_coiled-coil_domain-containing_protein_130_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:5.28 TPM:5.31
96 A_BomoSK_comp10039_c0_seq1
442bp
FPKM:10.41 TPM:10.47
97 A_BomoSK_comp10040_c0_seq1
571bp
 PREDICTED:_uncharacterized_protein_LOC106720812_[Papilio_machaon]
FPKM:3.23 TPM:3.25
98 A_BomoSK_comp10041_c0_seq1
550bp
FPKM:6.37 TPM:6.40
99 A_BomoSK_comp10041_c1_seq1
248bp
FPKM:5.14 TPM:5.17
100 A_BomoSK_comp10042_c0_seq1
736bp
 PREDICTED:_trithorax_group_protein_osa_[Bombyx_mori]
FPKM:1.23 TPM:1.24
101 A_BomoSK_comp100433_c0_seq1
3070bp
 PREDICTED:_kinase_suppressor_of_Ras_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
FPKM:2.94 TPM:2.96
102 A_BomoSK_comp10043_c0_seq1
4355bp
 PREDICTED:_uncharacterized_protein_LOC106129671_isoform_X2_[Amyelois_transitella]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.07 TPM:2.08
103 A_BomoSK_comp10043_c0_seq2
5030bp
 PREDICTED:_uncharacterized_protein_YHR080C-like_isoform_X1_[Amyelois_transitella]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:4.98 TPM:5.01
104 A_BomoSK_comp100443_c0_seq1
957bp
 hypothetical_protein_KGM_01960_[Danaus_plexippus]
FPKM:4.68 TPM:4.70
105 A_BomoSK_comp100447_c0_seq1
1663bp
 PREDICTED:_protein_prenyltransferase_alpha_subunit_repeat-containing_protein_1_[Amyelois_transitella]
GO:0004659 F prenyltransferase activity
GO:0005737 C cytoplasm
GO:0008318 F protein prenyltransferase activity
GO:0016740 F transferase activity
GO:0018342 P protein prenylation
GO:1990234 C transferase complex
FPKM:3.27 TPM:3.29
106 A_BomoSK_comp10044_c0_seq1
1091bp
 putative_o-sialoglycoprotein_endopeptidase_[Danaus_plexippus]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0046872 F metal ion binding
GO:0061711 F N(6)-L-threonylcarbamoyladenine synthase activity
FPKM:8.40 TPM:8.45
107 A_BomoSK_comp100451_c0_seq1
1752bp
FPKM:4.27 TPM:4.30
108 A_BomoSK_comp100452_c0_seq1
971bp
 PREDICTED:_glutathione_S-transferase_D7-like_[Bombyx_mori]
FPKM:4.81 TPM:4.84
109 A_BomoSK_comp10045_c0_seq1
1157bp
 FMN-dependent_NADH-azoreductase_[Halomonas_sp._TG39a]
FPKM:5.28 TPM:5.31
110 A_BomoSK_comp10045_c1_seq1
543bp
FPKM:4.75 TPM:4.78
111 A_BomoSK_comp100462_c0_seq1
1169bp
FPKM:4.24 TPM:4.26
112 A_BomoSK_comp10046_c0_seq1
857bp
 PREDICTED:_PRKR-interacting_protein_1_homolog_[Papilio_machaon]
GO:0005634 C nucleus
GO:0005730 C nucleolus
FPKM:6.05 TPM:6.08
113 A_BomoSK_comp10046_c1_seq1
416bp
FPKM:0.99 TPM:0.99
114 A_BomoSK_comp100478_c0_seq1
877bp
FPKM:4.73 TPM:4.76
115 A_BomoSK_comp10047_c0_seq1
2823bp
 Organic_cation_transporter_protein_[Papilio_xuthus]
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007390 P germ-band shortening
GO:0008324 F cation transmembrane transporter activity
GO:0015101 F organic cation transmembrane transporter activity
GO:0015695 P organic cation transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0030307 P positive regulation of cell growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0055085 P transmembrane transport
GO:0098655 P cation transmembrane transport
FPKM:4.41 TPM:4.44
116 A_BomoSK_comp100481_c0_seq1
201bp
FPKM:1.99 TPM:2.01
117 A_BomoSK_comp100485_c0_seq1
785bp
 PREDICTED:_mitoferrin-1-like_[Plutella_xylostella]
GO:0003735 F structural constituent of ribosome
GO:0005381 F iron ion transmembrane transporter activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006839 P mitochondrial transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0031966 C mitochondrial membrane
GO:0034755 P iron ion transmembrane transport
GO:0048250 P iron import into the mitochondrion
GO:0048515 P spermatid differentiation
GO:0055072 P iron ion homeostasis
GO:0055085 P transmembrane transport
GO:0060586 P multicellular organismal iron ion homeostasis
FPKM:6.03 TPM:6.06
118 A_BomoSK_comp100495_c0_seq1
1363bp
FPKM:3.20 TPM:3.22
119 A_BomoSK_comp1005060_c0_seq1
233bp
FPKM:0.00 TPM:0.00
120 A_BomoSK_comp10050_c0_seq1
2022bp
 PREDICTED:_protein_RCC2_homolog_[Amyelois_transitella]
GO:0000775 C chromosome, centromeric region
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007229 P integrin-mediated signaling pathway
GO:0008017 F microtubule binding
GO:0010762 P regulation of fibroblast migration
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0016020 C membrane
GO:0019901 F protein kinase binding
GO:0019904 F protein domain specific binding
GO:0030334 P regulation of cell migration
GO:0030496 C midbody
GO:0031267 F small GTPase binding
GO:0031901 C early endosome membrane
GO:0034260 P negative regulation of GTPase activity
GO:0034506 C chromosome, centromeric core domain
GO:0044822 F RNA binding
GO:0045184 P establishment of protein localization
GO:0048041 P focal adhesion assembly
GO:0048365 F small GTPase binding
GO:0051301 P cell division
GO:0051895 P negative regulation of focal adhesion assembly
GO:0051987 P positive regulation of attachment of spindle microtubules to kinetochore
GO:0072356 P chromosome passenger complex localization to kinetochore
GO:0090630 P activation of GTPase activity
GO:1900025 P negative regulation of substrate adhesion-dependent cell spreading
GO:1900027 P regulation of ruffle assembly
GO:1990023 C mitotic spindle midzone
FPKM:2.73 TPM:2.74
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