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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
721 A_BomoSK_comp10361_c1_seq1
384bp
FPKM:2.29 TPM:2.31
722 A_BomoSK_comp1036228_c0_seq1
217bp
 ABC_transporter_ATP-binding_protein_[Hassallia_byssoidea]
FPKM:2.82 TPM:2.83
723 A_BomoSK_comp10362_c0_seq1
5878bp
 PREDICTED:_uncharacterized_protein_LOC101738424_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006606 P protein import into nucleus
GO:0007049 P cell cycle
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0010941 P regulation of cell death
GO:0016568 P chromatin organization
GO:0035064 F methylated histone binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:4.98 TPM:5.01
724 A_BomoSK_comp10363_c0_seq1
1709bp
 Uncharacterized_protein_OBRU01_03031_[Operophtera_brumata]
FPKM:5.35 TPM:5.39
725 A_BomoSK_comp10364_c0_seq1
1030bp
 PREDICTED:_F-box/SPRY_domain-containing_protein_1_[Plutella_xylostella]
GO:0007274 P neuromuscular synaptic transmission
GO:0007399 P nervous system development
GO:0016567 P protein ubiquitination
GO:0030054 C cell junction
GO:0031594 C neuromuscular junction
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
FPKM:0.47 TPM:0.47
726 A_BomoSK_comp10364_c0_seq2
1121bp
 PREDICTED:_F-box/SPRY_domain-containing_protein_1-like_[Amyelois_transitella]
GO:0007274 P neuromuscular synaptic transmission
GO:0007399 P nervous system development
GO:0016567 P protein ubiquitination
GO:0030054 C cell junction
GO:0031594 C neuromuscular junction
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
FPKM:7.47 TPM:7.51
727 A_BomoSK_comp10365_c0_seq1
2136bp
 PREDICTED:_uncharacterized_protein_LOC105841590_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
FPKM:1.61 TPM:1.62
728 A_BomoSK_comp10366_c0_seq1
582bp
 hypothetical_protein_DICVIV_13527_[Dictyocaulus_viviparus]
FPKM:7.14 TPM:7.18
729 A_BomoSK_comp10366_c1_seq1
471bp
FPKM:7.16 TPM:7.20
730 A_BomoSK_comp10367_c0_seq1
984bp
 PREDICTED:_uncharacterized_protein_LOC105841570_[Bombyx_mori]
FPKM:1.55 TPM:1.56
731 A_BomoSK_comp10367_c1_seq1
598bp
FPKM:3.02 TPM:3.04
732 A_BomoSK_comp10367_c1_seq2
320bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_8_homolog_[Bombyx_mori]
FPKM:1.54 TPM:1.55
733 A_BomoSK_comp10367_c1_seq3
2151bp
 PREDICTED:_vacuolar_protein_sorting-associated_protein_8_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005769 C early endosome
GO:0008270 F zinc ion binding
GO:0033263 C CORVET complex
GO:0034058 P endosomal vesicle fusion
GO:0046872 F metal ion binding
FPKM:6.99 TPM:7.03
734 A_BomoSK_comp10369_c0_seq1
336bp
FPKM:4.92 TPM:4.94
735 A_BomoSK_comp10370_c0_seq1
299bp
FPKM:0.50 TPM:0.50
736 A_BomoSK_comp10371_c0_seq1
2078bp
FPKM:4.96 TPM:4.99
737 A_BomoSK_comp10371_c1_seq1
2119bp
 PREDICTED:_putative_phosphatidate_phosphatase_isoform_X2_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0005918 C septate junction
GO:0006644 P phospholipid metabolic process
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0007424 P open tracheal system development
GO:0008195 F phosphatidate phosphatase activity
GO:0008354 P germ cell migration
GO:0009880 P embryonic pattern specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019991 P septate junction assembly
GO:0035233 P germ cell repulsion
GO:0035234 P ectopic germ cell programmed cell death
GO:0042577 F lipid phosphatase activity
GO:0042803 F protein homodimerization activity
GO:0045177 C apical part of cell
GO:0045824 P negative regulation of innate immune response
GO:0046839 P phospholipid dephosphorylation
GO:0050829 P defense response to Gram-negative bacterium
FPKM:6.57 TPM:6.61
738 A_BomoSK_comp10372_c0_seq1
2928bp
 PREDICTED:_zinc_finger_protein_850-like_isoform_X3_[Monodelphis_domestica]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:1.32 TPM:1.32
739 A_BomoSK_comp10372_c0_seq2
2630bp
 PREDICTED:_zinc_finger_protein_850-like_isoform_X3_[Monodelphis_domestica]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:0.66 TPM:0.66
740 A_BomoSK_comp10373_c0_seq1
352bp
FPKM:2.05 TPM:2.06
741 A_BomoSK_comp10373_c1_seq1
1576bp
 PREDICTED:_phosphatidylserine_synthase_1_[Amyelois_transitella]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006659 P phosphatidylserine biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
FPKM:4.29 TPM:4.31
742 A_BomoSK_comp10374_c0_seq1
1216bp
 PREDICTED:_uncharacterized_protein_LOC105380399_[Plutella_xylostella]
FPKM:3.77 TPM:3.79
743 A_BomoSK_comp10374_c0_seq2
482bp
 PREDICTED:_uncharacterized_protein_LOC105380399_[Plutella_xylostella]
FPKM:3.44 TPM:3.46
744 A_BomoSK_comp10375_c0_seq1
561bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_F09G8.5_[Bombyx_mori]
FPKM:8.29 TPM:8.34
745 A_BomoSK_comp103761_c0_seq1
824bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:4.33 TPM:4.36
746 A_BomoSK_comp103768_c0_seq1
577bp
FPKM:1.16 TPM:1.16
747 A_BomoSK_comp10376_c0_seq1
358bp
 PREDICTED:_protein_UBASH3A_homolog_[Plutella_xylostella]
FPKM:1.32 TPM:1.33
748 A_BomoSK_comp10376_c1_seq1
363bp
 longer_ecdysteroid-phosphate_phosphatase_[Bombyx_mori]
GO:0005829 C cytosol
GO:0016311 P dephosphorylation
GO:0016791 F phosphatase activity
FPKM:1.28 TPM:1.29
749 A_BomoSK_comp10377_c0_seq1
295bp
 Glycerate_2-kinase_[Mollicutes_bacterium_HR2]
FPKM:1.55 TPM:1.56
750 A_BomoSK_comp10378_c0_seq1
2409bp
FPKM:2.60 TPM:2.62
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