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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
631 A_BomoSK_comp10312_c0_seq1
250bp
 cobalt_ABC_transporter_permease_[Deferribacter_desulfuricans]
FPKM:0.00 TPM:0.00
632 A_BomoSK_comp10313_c0_seq1
394bp
 ATG_protein_[Ancylostoma_ceylanicum]
FPKM:1.36 TPM:1.37
633 A_BomoSK_comp10313_c0_seq2
343bp
 unnamed_protein_product_[Vitrella_brassicaformis_CCMP3155]
FPKM:3.25 TPM:3.27
634 A_BomoSK_comp10314_c0_seq1
722bp
 hypothetical_protein_KGM_14562_[Danaus_plexippus]
GO:0000110 C nucleotide-excision repair factor 1 complex
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0046872 F metal ion binding
GO:0070914 P UV-damage excision repair
GO:1901255 P nucleotide-excision repair involved in interstrand cross-link repair
FPKM:7.97 TPM:8.02
635 A_BomoSK_comp10314_c0_seq2
633bp
 hypothetical_protein_KGM_14562_[Danaus_plexippus]
GO:0000110 C nucleotide-excision repair factor 1 complex
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0046872 F metal ion binding
GO:0070914 P UV-damage excision repair
GO:1901255 P nucleotide-excision repair involved in interstrand cross-link repair
FPKM:1.93 TPM:1.94
636 A_BomoSK_comp10315_c0_seq1
750bp
FPKM:3.47 TPM:3.49
637 A_BomoSK_comp10316_c0_seq1
1255bp
 PREDICTED:_rab11_family-interacting_protein_4_isoform_X3_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0003700 F DNA-binding transcription factor activity
GO:0005509 F calcium ion binding
GO:0005768 C endosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0030139 C endocytic vesicle
GO:0030306 F small GTPase binding
GO:0030496 C midbody
GO:0031410 C cytoplasmic vesicle
GO:0032154 C cleavage furrow
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0048592 P eye morphogenesis
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0055038 C recycling endosome membrane
FPKM:9.39 TPM:9.44
638 A_BomoSK_comp10316_c0_seq2
1146bp
 PREDICTED:_rab11_family-interacting_protein_4A_isoform_X1_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0003700 F DNA-binding transcription factor activity
GO:0005509 F calcium ion binding
GO:0005768 C endosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0030139 C endocytic vesicle
GO:0030306 F small GTPase binding
GO:0030496 C midbody
GO:0031410 C cytoplasmic vesicle
GO:0032154 C cleavage furrow
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0048592 P eye morphogenesis
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0055038 C recycling endosome membrane
FPKM:17.34 TPM:17.44
639 A_BomoSK_comp10317_c0_seq1
301bp
 thiamine/thiamine_pyrophosphate_ABC_transporter,_permease_protein_[Oceanimonas_smirnovii]
FPKM:3.43 TPM:3.45
640 A_BomoSK_comp10317_c1_seq1
248bp
FPKM:4.28 TPM:4.31
641 A_BomoSK_comp10318_c0_seq1
398bp
 PREDICTED:_kinesin-related_protein_4_[Bombyx_mori]
FPKM:1.34 TPM:1.35
642 A_BomoSK_comp10318_c1_seq1
1520bp
 PREDICTED:_kinesin-related_protein_4_[Bombyx_mori]
FPKM:1.86 TPM:1.87
643 A_BomoSK_comp10319_c0_seq1
296bp
 unknown_[Bacteroides_sp._CAG:98]
FPKM:1.53 TPM:1.54
644 A_BomoSK_comp10319_c1_seq1
257bp
 hybrid_sensor_histidine_kinase/response_regulator_[Pseudoalteromonas_atlantica]
FPKM:3.05 TPM:3.07
645 A_BomoSK_comp10319_c2_seq1
265bp
FPKM:2.78 TPM:2.80
646 A_BomoSK_comp103202_c0_seq1
442bp
FPKM:7.31 TPM:7.35
647 A_BomoSK_comp1032072_c0_seq1
217bp
FPKM:2.82 TPM:2.83
648 A_BomoSK_comp10320_c0_seq1
231bp
 hypothetical_protein_NCER_102615_[Nosema_ceranae_BRL01]
FPKM:0.00 TPM:0.00
649 A_BomoSK_comp10320_c1_seq1
419bp
FPKM:2.92 TPM:2.94
650 A_BomoSK_comp10321_c0_seq1
1979bp
 carboxylesterase_[Cnaphalocrocis_medinalis]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:3.90 TPM:3.93
651 A_BomoSK_comp10321_c0_seq2
1897bp
 carboxylesterase_[Cnaphalocrocis_medinalis]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:2.68 TPM:2.69
652 A_BomoSK_comp103238_c0_seq1
827bp
 PREDICTED:_trafficking_protein_particle_complex_subunit_8_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192 P vesicle-mediated transport
GO:0030242 P autophagy of peroxisome
GO:0031410 C cytoplasmic vesicle
GO:0032258 P cytoplasm to vacuole transport by the Cvt pathway
GO:0034497 P protein localization to phagophore assembly site
GO:0044804 P autophagy of nucleus
GO:1990072 C TRAPPIII protein complex
FPKM:5.10 TPM:5.13
653 A_BomoSK_comp10323_c0_seq1
261bp
FPKM:3.64 TPM:3.66
654 A_BomoSK_comp103249_c0_seq1
202bp
 ABC_transporter_permease,_partial_[Microbacterium_sp._SUBG005]
FPKM:0.00 TPM:0.00
655 A_BomoSK_comp10324_c0_seq1
1230bp
FPKM:2.65 TPM:2.66
656 A_BomoSK_comp103259_c0_seq1
329bp
FPKM:5.55 TPM:5.58
657 A_BomoSK_comp10325_c0_seq1
393bp
 hypothetical_protein_AMS26_08420_[Bacteroides_sp._SM23_62]
FPKM:0.00 TPM:0.00
658 A_BomoSK_comp10325_c0_seq2
504bp
FPKM:1.96 TPM:1.97
659 A_BomoSK_comp10325_c1_seq1
390bp
FPKM:1.11 TPM:1.12
660 A_BomoSK_comp10326_c0_seq1
1052bp
FPKM:1.82 TPM:1.83
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