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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
511 A_BomoSK_comp10245_c0_seq2
833bp
 PREDICTED:_1-acylglycerol-3-phosphate_O-acyltransferase_ABHD5_isoform_X3_[Bombyx_mori]
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0019915 P lipid storage
GO:0052689 F carboxylic ester hydrolase activity
FPKM:1.00 TPM:1.01
512 A_BomoSK_comp10245_c0_seq3
797bp
 PREDICTED:_1-acylglycerol-3-phosphate_O-acyltransferase_ABHD5_isoform_X3_[Bombyx_mori]
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0019915 P lipid storage
GO:0052689 F carboxylic ester hydrolase activity
FPKM:5.67 TPM:5.70
513 A_BomoSK_comp10245_c0_seq4
894bp
 PREDICTED:_1-acylglycerol-3-phosphate_O-acyltransferase_ABHD5_isoform_X3_[Bombyx_mori]
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0019915 P lipid storage
GO:0052689 F carboxylic ester hydrolase activity
FPKM:1.63 TPM:1.64
514 A_BomoSK_comp10246_c0_seq1
1288bp
 PREDICTED:_charged_multivesicular_body_protein_5_[Amyelois_transitella]
GO:0000815 C ESCRT III complex
GO:0003674 F molecular_function
GO:0005768 C endosome
GO:0006810 P transport
GO:0007034 P vacuolar transport
GO:0007293 P germarium-derived egg chamber formation
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030713 P ovarian follicle cell stalk formation
GO:0032509 P endosome transport via multivesicular body sorting pathway
GO:0045807 P positive regulation of endocytosis
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0060429 P epithelium development
FPKM:41.03 TPM:41.27
515 A_BomoSK_comp10247_c0_seq1
1654bp
 PREDICTED:_E3_ubiquitin-protein_ligase_SMURF2_isoform_X2_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006464 P cellular protein modification process
GO:0007398 P ectoderm development
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0030509 P BMP signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0042787 P ubiquitin-dependent protein catabolic process
FPKM:5.44 TPM:5.47
516 A_BomoSK_comp10248_c0_seq1
573bp
FPKM:2.05 TPM:2.06
517 A_BomoSK_comp10248_c1_seq1
241bp
FPKM:1.89 TPM:1.90
518 A_BomoSK_comp10248_c2_seq1
207bp
 acyl-CoA_dehydrogenase_[Acinetobacter_junii]
FPKM:1.73 TPM:1.74
519 A_BomoSK_comp10249_c0_seq1
1345bp
 PREDICTED:_myosin_heavy_chain_95F_[Amyelois_transitella]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006997 P nucleus organization
GO:0007015 P actin filament organization
GO:0007051 P spindle organization
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0007297 P ovarian follicle cell migration
GO:0007298 P border follicle cell migration
GO:0007391 P dorsal closure
GO:0007552 P metamorphosis
GO:0007560 P imaginal disc morphogenesis
GO:0008017 F microtubule binding
GO:0008104 P protein localization
GO:0008152 P metabolic process
GO:0008363 P larval chitin-based cuticle development
GO:0016333 P morphogenesis of follicular epithelium
GO:0016459 C myosin complex
GO:0016461 C unconventional myosin complex
GO:0019749 P cytoskeleton-dependent cytoplasmic transport, nurse cell to oocyte
GO:0030036 P actin cytoskeleton organization
GO:0030048 P actin filament-based movement
GO:0030139 C endocytic vesicle
GO:0030317 P flagellated sperm motility
GO:0030426 C growth cone
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0031476 C myosin VI complex
GO:0031941 C filamentous actin
GO:0032027 F myosin light chain binding
GO:0032880 P regulation of protein localization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032970 P regulation of actin filament-based process
GO:0040001 P establishment of mitotic spindle localization
GO:0042623 F ATP hydrolysis activity
GO:0043234 C protein-containing complex
GO:0045167 P asymmetric protein localization involved in cell fate determination
GO:0045172 C germline ring canal
GO:0045175 P basal protein localization
GO:0045178 C basal part of cell
GO:0045217 P cell-cell junction maintenance
GO:0045921 P positive regulation of exocytosis
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0051015 F actin filament binding
GO:0051647 P nucleus localization
GO:0055057 P neuroblast division
GO:0055059 P asymmetric neuroblast division
GO:0061024 P membrane organization
GO:0070856 F myosin VI light chain binding
GO:0070864 C sperm individualization complex
GO:0070865 C investment cone
FPKM:7.04 TPM:7.08
520 A_BomoSK_comp102503_c0_seq1
557bp
 PREDICTED:_uncharacterized_protein_LOC106132264_[Amyelois_transitella]
FPKM:6.55 TPM:6.59
521 A_BomoSK_comp102514_c0_seq1
1143bp
FPKM:2.29 TPM:2.31
522 A_BomoSK_comp10251_c0_seq1
470bp
 PREDICTED:_WD_repeat_and_FYVE_domain-containing_protein_3_[Bombyx_mori]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
FPKM:1.04 TPM:1.04
523 A_BomoSK_comp10251_c0_seq2
1409bp
 PREDICTED:_WD_repeat_and_FYVE_domain-containing_protein_3_[Bombyx_mori]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
FPKM:2.61 TPM:2.63
524 A_BomoSK_comp1025239_c0_seq1
270bp
FPKM:1.31 TPM:1.32
525 A_BomoSK_comp10253_c0_seq1
1653bp
FPKM:5.43 TPM:5.47
526 A_BomoSK_comp1025407_c0_seq1
203bp
 PREDICTED:_uncharacterized_protein_LOC101738525_[Bombyx_mori]
FPKM:1.90 TPM:1.91
527 A_BomoSK_comp10254_c0_seq1
412bp
FPKM:0.75 TPM:0.76
528 A_BomoSK_comp10255_c0_seq1
1911bp
 PREDICTED:_protein_transport_protein_Sec24A_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030127 C COPII vesicle coat
GO:0045714 P obsolete regulation of low-density lipoprotein particle receptor biosynthetic process
GO:0048208 P COPII vesicle coating
GO:0048471 C perinuclear region of cytoplasm
GO:0050714 P positive regulation of protein secretion
GO:2000189 P cholesterol homeostasis
FPKM:6.40 TPM:6.43
529 A_BomoSK_comp102561_c0_seq1
2750bp
 PREDICTED:_rho-associated_protein_kinase_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0001726 C ruffle
GO:0003383 P apical constriction
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005814 C centriole
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006921 P cellular component disassembly involved in execution phase of apoptosis
GO:0006939 P smooth muscle contraction
GO:0007159 P leukocyte cell-cell adhesion
GO:0007165 P signal transduction
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0007266 P Rho protein signal transduction
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016525 P negative regulation of angiogenesis
GO:0016740 F transferase activity
GO:0017048 F small GTPase binding
GO:0017049 F small GTPase binding
GO:0022614 P membrane to membrane docking
GO:0030027 C lamellipodium
GO:0030036 P actin cytoskeleton organization
GO:0030155 P regulation of cell adhesion
GO:0030866 P cortical actin cytoskeleton organization
GO:0032059 C bleb
GO:0032060 P bleb assembly
GO:0032091 P negative regulation of protein binding
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032970 P regulation of actin filament-based process
GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045616 P regulation of keratinocyte differentiation
GO:0046872 F metal ion binding
GO:0048010 P vascular endothelial growth factor receptor signaling pathway
GO:0048013 P ephrin receptor signaling pathway
GO:0050900 P leukocyte migration
GO:0050901 P leukocyte tethering or rolling
GO:0051451 P myoblast migration
GO:0051492 P regulation of stress fiber assembly
GO:0051493 P regulation of cytoskeleton organization
GO:0051893 P regulation of focal adhesion assembly
GO:0051894 P positive regulation of focal adhesion assembly
GO:0090002 P protein localization to plasma membrane
GO:1903140 P regulation of establishment of endothelial barrier
GO:1903347 P negative regulation of bicellular tight junction assembly
GO:2000114 P regulation of establishment of cell polarity
GO:2000145 P regulation of cell motility
FPKM:4.84 TPM:4.87
530 A_BomoSK_comp102567_c0_seq1
432bp
 PREDICTED:_autophagy-related_protein_9A_[Strongylocentrotus_purpuratus]
FPKM:3.00 TPM:3.01
531 A_BomoSK_comp10256_c0_seq1
255bp
 aTP-binding_region_ATPase_domain_protein_[Clostridium_sp._CAG:632]
FPKM:0.78 TPM:0.79
532 A_BomoSK_comp10256_c1_seq1
1194bp
FPKM:6.31 TPM:6.35
533 A_BomoSK_comp10257_c0_seq1
309bp
 hypothetical_protein_UR29_C0002G0002_[Candidatus_Woesebacteria_bacterium_GW2011_GWC2_33_12]
FPKM:0.92 TPM:0.92
534 A_BomoSK_comp10257_c1_seq1
250bp
 olfactory_receptor_[Bombyx_mori]
FPKM:4.17 TPM:4.19
535 A_BomoSK_comp10257_c2_seq1
318bp
FPKM:0.43 TPM:0.43
536 A_BomoSK_comp10258_c0_seq1
277bp
 olfactory_receptor_[Bombyx_mori]
FPKM:1.83 TPM:1.84
537 A_BomoSK_comp10258_c1_seq1
1008bp
FPKM:2.19 TPM:2.21
538 A_BomoSK_comp10259_c0_seq1
1795bp
 PREDICTED:_mitogen-activated_protein_kinase-binding_protein_1-like_isoform_X2_[Papilio_polytes]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0007256 P obsolete activation of JNKK activity
FPKM:2.38 TPM:2.39
539 A_BomoSK_comp10259_c0_seq2
2180bp
 PREDICTED:_mitogen-activated_protein_kinase-binding_protein_1_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0007256 P obsolete activation of JNKK activity
FPKM:5.78 TPM:5.82
540 A_BomoSK_comp10259_c0_seq3
658bp
 PREDICTED:_ataxin-10_[Cyprinodon_variegatus]
FPKM:7.06 TPM:7.10
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