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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp10247_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_SMURF2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006464 P cellular protein modification process
GO:0007398 P ectoderm development
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030154 P cell differentiation
GO:0030509 P BMP signaling pathway
GO:0030514 P negative regulation of BMP signaling pathway
GO:0042787 P ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:5.44 TPM:5.47
ORF EntryO_BomoSK6954_5prime_partial:A_BomoSK_comp10247_c0_seq1
Sequence
(Nucleotide)
TTATTTGGTATTAGTATCAACAATCTTGAAATTTACAACAAATACACGTTTCTTTTTAAG
GTGATACCGTCGTGACCATCACCAAAGATAAGTCAACGAACCAGAAAACTGAACAGATTA
TATAATGTTACTGGAATTTAAGTTAATATTTCAATTGCAAAGCCTTGATTTGCAAAGTTA
TAATAAACAATGCACTTTTGTCACAAAATTCTCAGTCTTGATTAGAAAAGCTACCGATAA
CGAACAGCCAACTTGTCGAATTTGATATATTTTATAGGGCTTACGGCTTTTTAGTGCATT
TGATGGTAGACATCACATGGTTCTCGTGTCAAATTGTCATGGACATTCGCAATTTAAGAC
TCTGGAGTAGCTTAATAGAGATGTCGACAAACATTTTAAAACTGTTCTTATTTTATAGAT
CATATAATTAATTTAACCAATATTTTTTTATACGAAACGAATTTCATATATAAAATAATA
TGATAATAATTTAATTTATAAATAAACCAGATATTTCTAAGCAATATCCTGCTAAAACGC
TAGAAGTTATTGTCTGACGTTATTAACAACATCTCTTGTGATCGTGTAAAATTATTTATT
TCTTTTATTTGAAGATTTTATTTTACTTATTTCCTGTACCTTTTGTTTCAATTATCGTTA
CCTAGAAATCTTCATCAAAAAAGGTCAAAGTTCAAAAAATTTTGATCATCTGTAATGGCC
ATTTTATATGATATTCTAGAGTGCAGTTTTTTTTAGATAAGCACTGAGGCCTGGACCCAG
AACAGATTTGTGCAGGCTCACAAAATTTTATTTTATTTAATAATTTATGTAACCCAAATT
ATCGTGAACACATTACTTGTTATAGCGGAATGCAATGATCTCTCTAATGTTTGTTTCGAG
CTAAGTACCATTTTAGTTAAAATATGTACCAATCTTTAAAGACACTAAATTTCTATACTA
TATATAAATTGCGACAGTATCCCATTTTGTAATGACTGATTAAATGAGGCCACAAGAGTT
AGTGACGTAATTACATAATATGGTATGTGTTATACACAGTAGTTTACAATTTCAAGGAAG
GCCTATCTTCTTCAATTTTTAGTATTACTTGCTTTATGTTGCCTAACTCTAGCTAATTTT
AAGATATTATGACACAAGGTATACCGTTTCGAGCACACTTTTTAATTAAAAAACAACTTA
GGCCACCTTCGCTCTTATGTCCTCAAATAATTTTGTGCGTACAAATAATTTAACCGGTAA
ATTTACCCGTTTTCGTCGGTCATTCGACAGCGAATCCGGCGGTCTCGAGAATAGCTTGCT
TCAATTTGTCGTGCAGTTTCTGCTTGGTCGGATAGGGAGGTAGGTCGAGGCGGTTGAAGC
ACGTGTGTGCTTTCGGCAGAGAATCCGGAGTCGCGTCCGCAACCAGGTGCAGTGTGAACA
GTCGCGGAGCCGCCACACCAGTTGAACCCTGTAGAGCCCTGAATCCGGCGAGGGGCACTC
GTCGCGATCCGGTGACGAACTGCAAGAGGCGAGCGCGCATCTCCTGGTCGAATTCGTCGA
CGATCTCCCAGAACCACTGGGCGAGCGCGGAGTCGGGCGCGAGGTGCTTGAGGCGCGTGT
GCCGGCGCCAGTCGGTGGGGGCGAGGTCGGCGCG
(1654 bp)

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