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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
31 A_BomoSK_comp100104_c0_seq1
822bp
 cuticular_protein_RR-1_motif_19_precursor_[Bombyx_mori]
GO:0042302 F structural constituent of cuticle
FPKM:5.41 TPM:5.44
32 A_BomoSK_comp10010_c0_seq1
4365bp
 PREDICTED:_protein_brunelleschi_isoform_X1_[Amyelois_transitella]
GO:0000281 P mitotic cytokinesis
GO:0000916 P actomyosin contractile ring contraction
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0007110 P meiosis I cytokinesis
GO:0007111 P meiosis II cytokinesis
GO:0007112 P male meiosis cytokinesis
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030008 C TRAPP complex
GO:0036063 C acroblast
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0048137 P spermatocyte division
FPKM:7.65 TPM:7.69
33 A_BomoSK_comp100113_c0_seq1
1186bp
FPKM:2.70 TPM:2.72
34 A_BomoSK_comp100115_c0_seq1
1996bp
 heparanase-like_protein_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005975 P carbohydrate metabolic process
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030200 P heparan sulfate proteoglycan catabolic process
GO:0030305 F heparanase activity
FPKM:3.85 TPM:3.87
35 A_BomoSK_comp10011_c0_seq1
339bp
FPKM:2.22 TPM:2.24
36 A_BomoSK_comp10011_c1_seq1
289bp
 PREDICTED:_forkhead_box_protein_K1_[Amyelois_transitella]
FPKM:10.75 TPM:10.81
37 A_BomoSK_comp10011_c1_seq2
354bp
 putative_forkhead_box_K1_[Danaus_plexippus]
FPKM:1.10 TPM:1.10
38 A_BomoSK_comp10012_c0_seq1
4963bp
 PREDICTED:_uncharacterized_protein_LOC106100444_isoform_X2_[Papilio_polytes]
FPKM:3.21 TPM:3.23
39 A_BomoSK_comp10013_c0_seq1
2641bp
 MOF_protein_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0000776 C kinetochore
GO:0003674 F molecular_function
GO:0004402 F histone acetyltransferase activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0008150 P biological_process
GO:0010506 P regulation of autophagy
GO:0016407 F acetyltransferase activity
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0019899 F enzyme binding
GO:0030099 P myeloid cell differentiation
GO:0035064 F methylated histone binding
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
GO:0071339 C MLL1 complex
GO:0072487 C MSL complex
FPKM:6.55 TPM:6.59
40 A_BomoSK_comp1001554_c0_seq1
218bp
FPKM:2.76 TPM:2.78
41 A_BomoSK_comp10015_c0_seq1
1566bp
 PREDICTED:_GATA_zinc_finger_domain-containing_protein_7-like,_partial_[Amyelois_transitella]
FPKM:1.30 TPM:1.31
42 A_BomoSK_comp10015_c1_seq1
1939bp
 Uncharacterized_protein_OBRU01_08796,_partial_[Operophtera_brumata]
FPKM:1.76 TPM:1.77
43 A_BomoSK_comp10015_c2_seq1
225bp
 Uncharacterized_protein_OBRU01_08796,_partial_[Operophtera_brumata]
FPKM:0.00 TPM:0.00
44 A_BomoSK_comp1001689_c0_seq1
260bp
FPKM:1.47 TPM:1.48
45 A_BomoSK_comp10016_c0_seq1
2019bp
 PREDICTED:_protein_O-mannosyltransferase_1_isoform_X2_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0000032 P cell wall mannoprotein biosynthetic process
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0007275 P multicellular organism development
GO:0007385 P specification of segmental identity, abdomen
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030259 P lipid glycosylation
GO:0031502 C dolichyl-phosphate-mannose-protein mannosyltransferase complex
GO:0035269 P protein O-linked mannosylation
GO:0044845 P chain elongation of O-linked mannose residue
GO:0045214 P sarcomere organization
GO:0060025 P regulation of synaptic activity
GO:1900101 P regulation of endoplasmic reticulum unfolded protein response
FPKM:2.31 TPM:2.32
46 A_BomoSK_comp10016_c0_seq2
2891bp
 PREDICTED:_protein_O-mannosyltransferase_1_isoform_X2_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0000032 P cell wall mannoprotein biosynthetic process
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0007275 P multicellular organism development
GO:0007385 P specification of segmental identity, abdomen
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030259 P lipid glycosylation
GO:0031502 C dolichyl-phosphate-mannose-protein mannosyltransferase complex
GO:0035269 P protein O-linked mannosylation
GO:0044845 P chain elongation of O-linked mannose residue
GO:0045214 P sarcomere organization
GO:0060025 P regulation of synaptic activity
GO:1900101 P regulation of endoplasmic reticulum unfolded protein response
FPKM:1.13 TPM:1.13
47 A_BomoSK_comp10016_c0_seq3
2616bp
 PREDICTED:_protein_O-mannosyltransferase_1_isoform_X2_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0000032 P cell wall mannoprotein biosynthetic process
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0007275 P multicellular organism development
GO:0007385 P specification of segmental identity, abdomen
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030259 P lipid glycosylation
GO:0031502 C dolichyl-phosphate-mannose-protein mannosyltransferase complex
GO:0035269 P protein O-linked mannosylation
GO:0044845 P chain elongation of O-linked mannose residue
GO:0045214 P sarcomere organization
GO:0060025 P regulation of synaptic activity
GO:1900101 P regulation of endoplasmic reticulum unfolded protein response
FPKM:2.71 TPM:2.73
48 A_BomoSK_comp100177_c0_seq1
1457bp
 PREDICTED:_chromatin_assembly_factor_1_subunit_A_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006334 P nucleosome assembly
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0031497 P chromatin assembly
GO:0033186 C CAF-1 complex
FPKM:4.43 TPM:4.45
49 A_BomoSK_comp100178_c0_seq1
1090bp
FPKM:3.24 TPM:3.26
50 A_BomoSK_comp10017_c0_seq1
312bp
FPKM:7.18 TPM:7.22
51 A_BomoSK_comp10017_c0_seq2
403bp
FPKM:1.57 TPM:1.58
52 A_BomoSK_comp100183_c0_seq1
3747bp
 PREDICTED:_apoptosis-stimulating_of_p53_protein_1_isoform_X2_[Papilio_polytes]
GO:0002039 F p53 binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006915 P apoptotic process
GO:0008134 F transcription factor binding
GO:0045786 P negative regulation of cell cycle
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:0097193 P intrinsic apoptotic signaling pathway
FPKM:3.98 TPM:4.00
53 A_BomoSK_comp10018_c0_seq1
1459bp
 PREDICTED:_tetratricopeptide_repeat_protein_4_[Papilio_machaon]
FPKM:8.32 TPM:8.37
54 A_BomoSK_comp10019_c0_seq1
214bp
FPKM:2.99 TPM:3.01
55 A_BomoSK_comp1001_c0_seq1
304bp
FPKM:0.95 TPM:0.96
56 A_BomoSK_comp100205_c0_seq1
350bp
FPKM:7.27 TPM:7.31
57 A_BomoSK_comp100207_c0_seq1
356bp
FPKM:5.34 TPM:5.37
58 A_BomoSK_comp100208_c0_seq1
840bp
 glutathione_S-transferase_epsilon_1_[Bombyx_mori]
GO:0004364 F glutathione transferase activity
GO:0008152 P metabolic process
GO:0016740 F transferase activity
FPKM:5.60 TPM:5.64
59 A_BomoSK_comp10021_c0_seq1
1056bp
 uroporphyrinogen-III_synthase_[Riemerella_anatipestifer]
FPKM:1.88 TPM:1.89
60 A_BomoSK_comp10021_c1_seq1
386bp
FPKM:1.99 TPM:2.00
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