SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoSK_comp100115_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		heparanase-like_protein_[Bombyx_mori]
Ontology
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005975 P carbohydrate metabolic process
GO:0007155 P cell adhesion
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030200 P heparan sulfate proteoglycan catabolic process
GO:0030305 F heparanase activity
Transcript
Level		FPKM:3.85 TPM:3.87
ORF EntryO_BomoSK28573_complete:A_BomoSK_comp100115_c0_seq1
Sequence
(Nucleotide)
TCATTAGTCATCTATAATTACTGTAAGACTTATATGAGATTATAGAAAAATGAGATTACT
AAACTGTTTGGCCAAATAGAATCAGATAGGAAGTTTAATGTAACTCATGTATATTTTGGA
ATGCCACCTAACTGTAAGGTTTGAGACAAAATGATGATTTGATAAGCCATTTAGATTAAA
GGAAATTGTTATTCGCATACAGTAATTGATGTTTTCTTAATTACCCAAAATCCAATAGAA
TATGGAGGTAGTGAAACATAGCGTCCATACCTATGAATATTAGGCCGCAAATTGTGTAAA
TTAGATTCATAATAAAGTGGCCAGCCATTTAACAATATTGTTTTTGATTTTCGGTTATTT
GAAGGTGCACTTATGATATATTCATGAATTATTAAATCGTCTCCATGTAAAGCAGTGCCA
TTAAGGAAGAATCGAGCTTTTGCCATTTCCAAATTAACACCATACAGTGTTACAGCTGAT
GTGTCATTAGTGTATTTTCTGTTGGTGCAATGAATATACAGTCTTTGAAACCTTGAGCAA
TTGCATTGCACCTGTAAAACTTTATTTCCAACCAATTTTTTATACAAGACACTGATCCAC
CAATCTGGTAAGGGTTTCAGATTTTCATCCACTAGGCTGTAATATCCACCAATAAAGCTT
TGTCGAATGACGGTGGATATATTGTATTTTGCCGATAGACCTAGTTTATCAATCCAAAGC
GGGCTACCTGCATAAGTATTTGATAATCCTGGTGCACCACCTCCATATGAGCTACTAGTT
TCACTTAGCCACATTGGGATATTTTTGTACTTCTTGGTTTGATTTTGCATTGTTTCTATT
TGCTGTCTGAGCAAATCAAATGTTTCTGGATTCCAAAAATCCTCCAATTTGGCAGTTTTA
CTGTTTAAATAATACTGATGCCATGATCTTACATTTATATAATGAGATCCATTACCTAAA
AATTCTATCATATATTTAAGGCATTCAGGACGGTGTGGTTGTGGTCTTGTTGTGTCTGGG
CCGACAATCAGAGAATGTCTGTAACCATTATGATTCAAAAGTTTACGTAGCTTTTCAAAG
TCCTTGGCTAATATTTGAGGAGTTACACTTTCATTAAAAACATGTTGAAAAGAGTTTGGC
TCGTTTCCTAACTGCCAATCAATAGCATACTGTTTGTGTTTTGAAAATTCAATAAGTTCT
CTAGCATTCTTTTCATTCCAACCATGATTATCACGAAGCATTGCATTCAACGAGAATAAC
AATTTTAGATTAGTCTTTCTGCAAAAATCGTTAATTTGGTTCCATTCATTTCCAGTCATT
ATAAAGAAGGGTAAAAACTTGTGTTTGTGTTTACATGGTTTTTCAATAAGTTGGCATAAA
GATTTTGGATAAGATTTATAACTACAATTGTGGCATGAAATTGGGATATTTTCTTTACTA
AATATGAGACGTTCAGACATGGTGCCGCCAAGACGAAGCCGCGCTGGGGATAGTGCTGCT
GCTAACTCCCTCAACCTAGTGTCCGAATAGTTAATTCTGTTGTAGTTCTCAATTTCAATG
GTGTCAATCCCAAAGCTGAGAAAGTCTTCCGAGATTAGCTTGATATCTTCTTGATTTTCA
TTAATCGTAACAAAGTACCTTACACCGCCGTTGTATTTTACAAATAATACGAGCATAGCC
ACGTTGCAGCAAAATGCTATCGCACATGTAGCTACTAATCGTTTATTCGACATCATTATT
CGTTTTCTTACAATTACGGTAATATTAACTGCAATATTGCAATTCGTAATTCACTACGAG
TATCAAATTCGTTAATTATAAGATTATTTAAAAACCATACCGCACTCCTTTATAGTTCAC
ACCCTTGAGTATATTTTCACATTAACTTTATCAAACTTTCTGTCGGTACATAGATTAGAC
TTAGACACTATGTAATTTCATTTCACTGACAGACTTGGAGAAAAATGGCGAAATAAATTG
ACTATCTTTATCATAG
(1996 bp)

- SilkBase 1999-2023 -