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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
991 A_BomoMG_comp155504_c0_seq1
302bp
FPKM:1.68 TPM:1.33
992 A_BomoMG_comp155535_c0_seq1
709bp
FPKM:3.96 TPM:3.13
993 A_BomoMG_comp155537_c0_seq1
579bp
 PREDICTED:_histone-lysine_N-methyltransferase,_H3_lysine-79_specific_isoform_X5_[Bombyx_mori]
GO:0000781 C chromosome, telomeric region
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006348 P subtelomeric heterochromatin assembly
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030702 P pericentric heterochromatin assembly
GO:0031151 F histone methyltransferase activity (H3-K79 specific)
GO:0032259 P methylation
GO:0034729 P histone H3-K79 methylation
GO:0035097 C histone methyltransferase complex
GO:0046331 P lateral inhibition
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0051726 P regulation of cell cycle
GO:2000637 P positive regulation of gene silencing by miRNA
FPKM:3.53 TPM:2.79
994 A_BomoMG_comp155539_c0_seq1
673bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101739362_[Bombyx_mori]
GO:0005044 F scavenger receptor activity
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0005923 C bicellular tight junction
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030246 F carbohydrate binding
GO:0034976 P response to endoplasmic reticulum stress
GO:0035002 P liquid clearance, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0045217 P cell-cell junction maintenance
GO:0061689 C tricellular tight junction
GO:0090557 P establishment of endothelial intestinal barrier
GO:1904274 P tricellular tight junction assembly
FPKM:3.74 TPM:2.96
995 A_BomoMG_comp155543_c0_seq1
552bp
 Ribonuclease_P/MRP_protein_subunit_POP5_[Operophtera_brumata]
GO:0004526 F ribonuclease P activity
GO:0004540 F ribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008033 P tRNA processing
GO:0009249 P protein lipoylation
GO:0016070 P RNA metabolic process
GO:0016787 F hydrolase activity
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:4.50 TPM:3.55
996 A_BomoMG_comp155545_c0_seq1
342bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_aminolevulinate,_delta-,_synthase_1_[Elephantulus_edwardii]
FPKM:4.01 TPM:3.17
997 A_BomoMG_comp155547_c0_seq1
305bp
FPKM:7.79 TPM:6.15
998 A_BomoMG_comp155608_c0_seq1
249bp
FPKM:7.68 TPM:6.07
999 A_BomoMG_comp155630_c0_seq1
1059bp
FPKM:4.48 TPM:3.54
1000 A_BomoMG_comp155671_c0_seq1
1365bp
 Facilitated_trehalose_transporter_Tret1_[Papilio_machaon]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:3.26 TPM:2.57
1001 A_BomoMG_comp155707_c0_seq1
1254bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
FPKM:3.49 TPM:2.75
1002 A_BomoMG_comp155721_c0_seq1
1589bp
 PREDICTED:_calcium_uptake_protein_1,_mitochondrial-like_[Amyelois_transitella]
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0046872 F metal ion binding
GO:0051561 P positive regulation of mitochondrial calcium ion concentration
FPKM:3.55 TPM:2.80
1003 A_BomoMG_comp155751_c0_seq1
496bp
FPKM:3.83 TPM:3.03
1004 A_BomoMG_comp155783_c0_seq1
694bp
FPKM:3.80 TPM:3.00
1005 A_BomoMG_comp155868_c0_seq1
1043bp
FPKM:3.40 TPM:2.68
1006 A_BomoMG_comp155895_c0_seq1
353bp
 Coiled-coil-helix-coiled-coil-helix_domain-containing_protein_8_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0033617 P mitochondrial cytochrome c oxidase assembly
FPKM:5.24 TPM:4.14
1007 A_BomoMG_comp155907_c0_seq1
230bp
FPKM:1.79 TPM:1.42
1008 A_BomoMG_comp156019_c0_seq1
202bp
 PREDICTED:_prominin-1_[Amyelois_transitella]
FPKM:12.60 TPM:9.96
1009 A_BomoMG_comp156027_c0_seq1
440bp
FPKM:1.40 TPM:1.10
1010 A_BomoMG_comp156148_c0_seq1
480bp
FPKM:4.13 TPM:3.26
1011 A_BomoMG_comp156153_c0_seq1
1024bp
 PREDICTED:_uncharacterized_protein_LOC105850790,_partial_[Hydra_vulgaris]
FPKM:2.45 TPM:1.94
1012 A_BomoMG_comp156168_c0_seq1
210bp
FPKM:1.75 TPM:1.39
1013 A_BomoMG_comp156170_c0_seq1
615bp
FPKM:3.17 TPM:2.51
1014 A_BomoMG_comp156177_c0_seq1
299bp
FPKM:6.38 TPM:5.04
1015 A_BomoMG_comp156191_c0_seq1
306bp
 PREDICTED:_paired_amphipathic_helix_protein_Sin3a_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000776 C kinetochore
GO:0000785 C chromatin
GO:0000976 F transcription cis-regulatory region binding
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001103 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0001106 F transcription corepressor activity
GO:0001701 P in utero embryonic development
GO:0002218 P activation of innate immune response
GO:0002230 P positive regulation of defense response to virus by host
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003714 F transcription corepressor activity
GO:0003723 F RNA binding
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006476 P protein deacetylation
GO:0007568 P aging
GO:0008134 F transcription factor binding
GO:0010243 P response to organonitrogen compound
GO:0010817 P regulation of hormone levels
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0016575 P histone deacetylation
GO:0016580 C Sin3 complex
GO:0017053 C transcription repressor complex
GO:0031937 P obsolete positive regulation of chromatin silencing
GO:0032403 F protein-containing complex binding
GO:0033558 F protein deacetylase activity
GO:0034613 P cellular protein localization
GO:0042754 P negative regulation of circadian rhythm
GO:0043066 P negative regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0043619 P regulation of transcription from RNA polymerase II promoter in response to oxidative stress
GO:0044255 P cellular lipid metabolic process
GO:0045171 C intercellular bridge
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048511 P rhythmic process
GO:0051595 P response to methylglyoxal
GO:0071333 P cellular response to glucose stimulus
GO:1900181 P negative regulation of protein localization to nucleus
GO:1901675 P negative regulation of histone H3-K27 acetylation
GO:1903351 P cellular response to dopamine
GO:2000678 P negative regulation of transcription regulatory region DNA binding
FPKM:9.14 TPM:7.22
1016 A_BomoMG_comp156207_c0_seq1
395bp
FPKM:3.90 TPM:3.08
1017 A_BomoMG_comp15622_c0_seq1
207bp
 PREDICTED:_G-protein_coupled_receptor_Mth2-like_[Bombyx_mori]
FPKM:0.61 TPM:0.48
1018 A_BomoMG_comp15625_c0_seq1
276bp
FPKM:0.87 TPM:0.69
1019 A_BomoMG_comp156273_c0_seq1
2395bp
 PREDICTED:_merlin,_partial_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0001745 P compound eye morphogenesis
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001934 P positive regulation of protein phosphorylation
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005938 C cell cortex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0007050 P regulation of cell cycle
GO:0007112 P male meiosis cytokinesis
GO:0007267 P cell-cell signaling
GO:0007283 P spermatogenesis
GO:0007291 P sperm individualization
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008092 F cytoskeletal protein binding
GO:0008101 P BMP signaling pathway
GO:0008285 P negative regulation of cell population proliferation
GO:0009798 P axis specification
GO:0009966 P regulation of signal transduction
GO:0016006 C Nebenkern
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0019094 P pole plasm mRNA localization
GO:0019898 C extrinsic component of membrane
GO:0030054 C cell junction
GO:0032456 P endocytic recycling
GO:0035329 P hippo signaling
GO:0035330 P regulation of hippo signaling
GO:0036375 C Kibra-Ex-Mer complex
GO:0042048 P olfactory behavior
GO:0042127 P regulation of cell population proliferation
GO:0042327 P positive regulation of phosphorylation
GO:0042802 F identical protein binding
GO:0042981 P regulation of apoptotic process
GO:0045169 C fusome
GO:0045595 P regulation of cell differentiation
GO:0046621 P negative regulation of organ growth
GO:0046669 P regulation of compound eye retinal cell programmed cell death
GO:0051307 P meiotic chromosome separation
GO:0060253 P negative regulation of glial cell proliferation
GO:0072659 P protein localization to plasma membrane
FPKM:3.25 TPM:2.57
1020 A_BomoMG_comp156281_c0_seq1
1224bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_CD109_antigen-like,_partial_[Bombyx_mori]
GO:0004866 F endopeptidase inhibitor activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0007566 P embryo implantation
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
GO:0032403 F protein-containing complex binding
GO:0048403 F brain-derived neurotrophic factor binding
GO:0048406 F nerve growth factor binding
FPKM:3.44 TPM:2.72
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