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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

1021

A_BomoMG_comp156300_c0_seq1

1124bp

Bomo_Chr5

PREDICTED:_uncharacterized_protein_LOC101740740_[Bombyx_mori]

GO:0005576	C	extracellular region
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005783	C	endoplasmic reticulum
GO:0005911	C	cell-cell junction
GO:0007155	P	cell adhesion

FPKM:3.49 TPM:2.76

1022

A_BomoMG_comp156302_c0_seq1

295bp

Bomo_Chr28

PREDICTED:_transcriptional_repressor_p66-alpha_[Bombyx_mori]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0000977	F	RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0006306	P	DNA methylation
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008270	F	zinc ion binding
GO:0016581	C	NuRD complex
GO:0016607	C	nuclear speck
GO:0030674	F	protein-macromolecule adaptor activity
GO:0043565	F	sequence-specific DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0046872	F	metal ion binding

FPKM:7.56 TPM:5.97

1023

A_BomoMG_comp156302_c0_seq2

294bp

Bomo_Chr28

PREDICTED:_transcriptional_repressor_p66-alpha_[Bombyx_mori]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0000977	F	RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0006306	P	DNA methylation
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008270	F	zinc ion binding
GO:0016581	C	NuRD complex
GO:0016607	C	nuclear speck
GO:0030674	F	protein-macromolecule adaptor activity
GO:0043565	F	sequence-specific DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0046872	F	metal ion binding

FPKM:0.00 TPM:0.00

1024

A_BomoMG_comp156378_c0_seq1

676bp

Bomo_Chr4

G-rich_sequence_factor_1,_partial_[Opisthocomus_hoazin]

FPKM:3.44 TPM:2.72

1025

A_BomoMG_comp156390_c0_seq1

1022bp

Bomo_Chr11

FPKM:4.07 TPM:3.22

1026

A_BomoMG_comp156404_c0_seq1

902bp

Bomo_Chr7

FPKM:3.15 TPM:2.49

1027

A_BomoMG_comp156440_c0_seq1

656bp

Bomo_Chr1

FPKM:5.18 TPM:4.09

1028

A_BomoMG_comp156487_c0_seq1

1382bp

Bomo_Chr19

PREDICTED:_tafazzin_homolog_[Amyelois_transitella]

GO:0005739	C	mitochondrion
GO:0006644	P	phospholipid metabolic process
GO:0007006	P	mitochondrial membrane organization
GO:0007007	P	inner mitochondrial membrane organization
GO:0007291	P	sperm individualization
GO:0008152	P	metabolic process
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016746	F	acyltransferase activity
GO:0031224	C	intrinsic component of membrane
GO:0031966	C	mitochondrial membrane
GO:0032048	P	cardiolipin metabolic process
GO:0032049	P	cardiolipin biosynthetic process
GO:0032577	F	phosphatidylcholine:cardiolipin O-linoleoyltransferase activity
GO:0035965	P	cardiolipin acyl-chain remodeling

FPKM:2.97 TPM:2.35

1029

A_BomoMG_comp156489_c0_seq1

532bp

Bomo_Chr18

FPKM:2.80 TPM:2.21

1030

A_BomoMG_comp156511_c0_seq1

927bp

Bomo_Chr7

FPKM:2.71 TPM:2.14

1031

A_BomoMG_comp156531_c0_seq1

250bp

Bomo_Chr6

FPKM:5.43 TPM:4.29

1032

A_BomoMG_comp156532_c0_seq1

559bp

Bomo_Chr26

FPKM:4.42 TPM:3.49

1033

A_BomoMG_comp156618_c0_seq1

288bp

Bomo_Chr19

FPKM:4.23 TPM:3.34

1034

A_BomoMG_comp156646_c0_seq1

1233bp

Bomo_Scaf002

PREDICTED:_protein_shuttle_craft_[Bombyx_mori]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0000977	F	RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001078	F	DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003697	F	single-stranded DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0003723	F	RNA binding
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006366	P	transcription by RNA polymerase II
GO:0007399	P	nervous system development
GO:0008270	F	zinc ion binding
GO:0046872	F	metal ion binding

FPKM:2.66 TPM:2.11

1035

A_BomoMG_comp156679_c0_seq1

459bp

Bomo_Chr20

salivary_cysteine-rich_peptide_precursor_[Bombyx_mori]

FPKM:4.89 TPM:3.86

1036

A_BomoMG_comp156683_c0_seq1

692bp

Bomo_Chr9

PREDICTED:_tRNA_(guanine-N(7)-)-methyltransferase_non-catalytic_subunit_wuho_[Papilio_machaon]

GO:0005634	C	nucleus
GO:0006400	P	tRNA modification
GO:0008033	P	tRNA processing
GO:0008176	F	tRNA (guanine-N7-)-methyltransferase activity
GO:0030488	P	tRNA methylation
GO:0036265	P	RNA (guanine-N7)-methylation

FPKM:3.20 TPM:2.53

1037

A_BomoMG_comp156697_c0_seq1

1940bp

Bomo_Chr5

neuroglian_[Mythimna_separata]

GO:0005509	F	calcium ion binding
GO:0005886	C	plasma membrane
GO:0005918	C	septate junction
GO:0005919	C	pleated septate junction
GO:0005923	C	bicellular tight junction
GO:0007155	P	cell adhesion
GO:0007158	P	neuron cell-cell adhesion
GO:0007173	P	epidermal growth factor receptor signaling pathway
GO:0007275	P	multicellular organism development
GO:0007409	P	axonogenesis
GO:0007560	P	imaginal disc morphogenesis
GO:0008045	P	motor neuron axon guidance
GO:0008049	P	male courtship behavior
GO:0008050	P	female courtship behavior
GO:0008366	P	axon ensheathment
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016319	P	mushroom body development
GO:0016328	C	lateral plasma membrane
GO:0019991	P	septate junction assembly
GO:0021682	P	nerve maturation
GO:0030054	C	cell junction
GO:0030175	C	filopodium
GO:0035011	P	melanotic encapsulation of foreign target
GO:0035151	P	regulation of tube size, open tracheal system
GO:0035230	C	cytoneme
GO:0045924	P	regulation of female receptivity
GO:0048036	P	central complex development
GO:0048675	P	axon extension
GO:0048812	P	neuron projection morphogenesis
GO:0048813	P	dendrite morphogenesis
GO:0050808	P	synapse organization
GO:0060857	P	establishment of glial blood-brain barrier
GO:0061343	P	cell adhesion involved in heart morphogenesis
GO:0072499	P	photoreceptor cell axon guidance

FPKM:3.08 TPM:2.43

1038

A_BomoMG_comp156758_c0_seq1

213bp

Bomo_Chr16

hypothetical_protein_KGM_15411_[Danaus_plexippus]

FPKM:15.67 TPM:12.38

1039

A_BomoMG_comp156776_c0_seq1

938bp

Bomo_Chr25

PREDICTED:_putative_helicase_Mov10l1_isoform_X1_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0000932	C	P-body
GO:0003723	F	RNA binding
GO:0004386	F	helicase activity
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0016787	F	hydrolase activity
GO:0031047	P	gene silencing by RNA
GO:0035279	P	miRNA-mediated gene silencing by mRNA destabilization

FPKM:2.77 TPM:2.19

1040

A_BomoMG_comp156793_c0_seq1

244bp

Bomo_Scaf006

FPKM:4.61 TPM:3.65

1041

A_BomoMG_comp156813_c0_seq1

241bp

Bomo_Chr16

FPKM:6.74 TPM:5.33

1042

A_BomoMG_comp156893_c0_seq1

500bp

Bomo_Scaf044

FPKM:3.48 TPM:2.75

1043

A_BomoMG_comp156975_c0_seq1

376bp

Bomo_Chr23

olfactory_receptor_[Bombyx_mori]

FPKM:4.55 TPM:3.60

1044

A_BomoMG_comp157030_c0_seq1

697bp

Bomo_Chr3

hypothetical_protein_PHACADRAFT_95219_[Phanerochaete_carnosa_HHB-10118-sp]

FPKM:3.17 TPM:2.51

1045

A_BomoMG_comp157069_c0_seq1

231bp

Bomo_Chr8

FPKM:1.78 TPM:1.41

1046

A_BomoMG_comp157101_c0_seq1

984bp

Bomo_Chr18

FPKM:3.41 TPM:2.70

1047

A_BomoMG_comp157137_c0_seq1

862bp

Bomo_Chr26

PREDICTED:_nicotinamide/nicotinic_acid_mononucleotide_adenylyltransferase_3_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0000309	F	nicotinamide-nucleotide adenylyltransferase activity
GO:0003824	F	catalytic activity
GO:0004515	F	nicotinate-nucleotide adenylyltransferase activity
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0009058	P	biosynthetic process
GO:0009435	P	NAD biosynthetic process
GO:0009611	P	response to wounding
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity
GO:0019363	P	pyridine nucleotide biosynthetic process
GO:0034628	P	'de novo' NAD biosynthetic process from aspartate

FPKM:4.10 TPM:3.24

1048

A_BomoMG_comp157211_c0_seq1

296bp

Bomo_Chr26

PREDICTED:_protein_Skeletor,_isoforms_B/C_[Bombyx_mori]

GO:0004500	F	dopamine beta-monooxygenase activity
GO:0005634	C	nucleus
GO:0005694	C	chromosome
GO:0005700	C	polytene chromosome
GO:0005730	C	nucleolus
GO:0005737	C	cytoplasm
GO:0005819	C	spindle
GO:0005856	C	cytoskeleton
GO:0005874	C	microtubule
GO:0006584	P	catecholamine metabolic process
GO:0006997	P	nucleus organization
GO:0007049	P	cell cycle
GO:0007067	P	mitotic cell cycle
GO:0016363	C	nuclear matrix
GO:0051225	P	spindle assembly
GO:0051301	P	cell division
GO:0051321	P	meiotic cell cycle
GO:0055114	P	obsolete oxidation-reduction process