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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
931 A_BomoMG_comp152252_c0_seq1
756bp
 PREDICTED:_actin-related_protein_5_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0031011 C Ino80 complex
FPKM:4.15 TPM:3.28
932 A_BomoMG_comp152386_c0_seq1
373bp
FPKM:5.11 TPM:4.03
933 A_BomoMG_comp152460_c0_seq1
442bp
FPKM:3.53 TPM:2.79
934 A_BomoMG_comp152485_c0_seq1
535bp
 PREDICTED:_uncharacterized_protein_LOC106118862_[Papilio_xuthus]
FPKM:4.41 TPM:3.48
935 A_BomoMG_comp152591_c0_seq1
1012bp
FPKM:4.12 TPM:3.25
936 A_BomoMG_comp152625_c0_seq1
1290bp
FPKM:4.32 TPM:3.41
937 A_BomoMG_comp152650_c0_seq1
1241bp
 PREDICTED:_WD_repeat-containing_protein_13-like_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:1904691 P negative regulation of type B pancreatic cell proliferation
GO:1990841 F promoter-specific chromatin binding
FPKM:3.73 TPM:2.95
938 A_BomoMG_comp152701_c0_seq1
916bp
 PREDICTED:_SLIT-ROBO_Rho_GTPase-activating_protein_3-like_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0030336 P negative regulation of cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0048365 F small GTPase binding
FPKM:3.23 TPM:2.55
939 A_BomoMG_comp152702_c0_seq1
859bp
FPKM:2.29 TPM:1.81
940 A_BomoMG_comp152766_c0_seq1
703bp
 heat_shock_protein_hsp_19.9_[Bombyx_mori]
GO:0006497 P protein lipidation
GO:0007275 P multicellular organism development
GO:0010506 P regulation of autophagy
GO:0010998 P regulation of translational initiation by eIF2 alpha phosphorylation
FPKM:3.34 TPM:2.64
941 A_BomoMG_comp152791_c0_seq1
650bp
 mitochondrial_ribosomal_protein_S10_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0019233 P sensory perception of pain
GO:0030529 C ribonucleoprotein complex
FPKM:5.61 TPM:4.43
942 A_BomoMG_comp152802_c0_seq1
1130bp
 PREDICTED:_integrator_complex_subunit_1-like_[Bombyx_mori]
GO:0001832 P blastocyst growth
GO:0001833 P inner cell mass cell proliferation
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016180 P snRNA processing
GO:0031965 C nuclear membrane
GO:0032039 C integrator complex
GO:0034474 P U2 snRNA 3'-end processing
GO:0043066 P negative regulation of apoptotic process
GO:0043154 P negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
FPKM:4.79 TPM:3.79
943 A_BomoMG_comp152822_c0_seq1
437bp
FPKM:3.59 TPM:2.84
944 A_BomoMG_comp152823_c0_seq1
601bp
 PREDICTED:_Krueppel-like_factor_7_isoform_X2_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0019221 P cytokine-mediated signaling pathway
GO:0046872 F metal ion binding
FPKM:4.17 TPM:3.30
945 A_BomoMG_comp152881_c0_seq1
2174bp
 hypothetical_protein_KGM_10434_[Danaus_plexippus]
GO:0004252 F serine-type endopeptidase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0019838 F growth factor binding
GO:0042058 P regulation of epidermal growth factor receptor signaling pathway
GO:0050708 P regulation of protein secretion
GO:0050709 P negative regulation of protein secretion
FPKM:3.38 TPM:2.67
946 A_BomoMG_comp152983_c0_seq1
1513bp
 PREDICTED:_protein_Daple_[Amyelois_transitella]
GO:0001932 P regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016055 P Wnt signaling pathway
GO:0030165 F PDZ domain binding
GO:0031098 P stress-activated protein kinase signaling cascade
GO:0031648 P protein destabilization
GO:0043621 F protein self-association
GO:0051260 P protein homooligomerization
FPKM:3.26 TPM:2.57
947 A_BomoMG_comp153065_c0_seq1
304bp
 hypothetical_protein_[Arenibacter_algicola]
FPKM:6.89 TPM:5.44
948 A_BomoMG_comp153089_c0_seq1
1619bp
 PREDICTED:_uncharacterized_protein_LOC106119141_[Papilio_xuthus]
GO:0000213 F tRNA-intron endonuclease activity
GO:0000214 C tRNA-intron endonuclease complex
GO:0000379 P tRNA-type intron splice site recognition and cleavage
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006397 P mRNA processing
GO:0008033 P tRNA processing
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:3.20 TPM:2.53
949 A_BomoMG_comp153091_c0_seq1
521bp
 hypothetical_protein_[Kosakonia_radicincitans]
FPKM:1.29 TPM:1.02
950 A_BomoMG_comp153093_c0_seq1
872bp
FPKM:3.23 TPM:2.55
951 A_BomoMG_comp153129_c0_seq1
290bp
FPKM:4.69 TPM:3.71
952 A_BomoMG_comp153134_c0_seq1
1756bp
 PREDICTED:_small_subunit_processome_component_20_homolog_[Bombyx_mori]
GO:0000447 P endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 P endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0008285 P negative regulation of cell population proliferation
GO:0030686 C 90S preribosome
GO:0030688 C preribosome, small subunit precursor
GO:0032040 C small-subunit processome
GO:0044822 F RNA binding
FPKM:2.70 TPM:2.13
953 A_BomoMG_comp153359_c0_seq1
715bp
FPKM:3.79 TPM:3.00
954 A_BomoMG_comp153372_c0_seq1
484bp
FPKM:4.41 TPM:3.49
955 A_BomoMG_comp153404_c0_seq1
283bp
FPKM:7.68 TPM:6.07
956 A_BomoMG_comp153611_c0_seq1
286bp
FPKM:6.98 TPM:5.51
957 A_BomoMG_comp153674_c0_seq1
316bp
FPKM:4.85 TPM:3.83
958 A_BomoMG_comp153769_c0_seq1
1053bp
FPKM:3.89 TPM:3.07
959 A_BomoMG_comp153770_c0_seq1
453bp
FPKM:3.52 TPM:2.78
960 A_BomoMG_comp153840_c0_seq1
2128bp
 PREDICTED:_transmembrane_protein_184C_[Papilio_xuthus]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.28 TPM:2.59
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