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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp153089_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106119141_[Papilio_xuthus]
Ontology
GO:0000213 F tRNA-intron endonuclease activity
GO:0000214 C tRNA-intron endonuclease complex
GO:0000379 P tRNA-type intron splice site recognition and cleavage
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006397 P mRNA processing
GO:0008033 P tRNA processing
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:3.20 TPM:2.53
ORF EntryO_BomoMG28218_internal:A_BomoMG_comp153089_c0_seq1
Sequence
(Nucleotide)
GGCATATACACTGGTAATACGATTGGCTTTATTTGTACATATGAGATACTGCCTAGGCCT
ACAACGGCGAATATTGTCGGTACATCGTCTTCGTATTTCGATATTAGAGCTGAGACATCC
GCTGCTGATGGAAGGCAACATGATTCGTCGATACAGCTCAAACGGAAATCTGGCTTTGGC
TTGTTGCTTTTTCTAAAACTCTTTATACTTCTGTTGTAAACATCAAAATCTATTCGGAGG
CTGGTCTCCTCTGGAATGTGAGTGTCTGCGGTTATTATTTGCAATTTCTCCAACATCTTC
GGCAAGTCGGAGAAGTCACCTGGCTTCACTAGGGGCTGCAGAGCAGACGTGTCAGCGCTA
GTTGACGGAATTTGATTCTTATAGTGTTTATTGGTGATTTCGATACATTTTAAGAAAGCT
ATTTTAATTTCTAACCAGCTTTCGTACTTATTCGGGCACTCCGATATGAGACTGTAGATG
TAGCCGTTGTTGAAAATGTCTGTAATGCGTGCGTTGTCGCGTCGGACGACTTCCGCTCGA
CCGAAATCATCATCACTCGGATACCAGTGCTTACTGAGTTCGTCTGGTCTCCGATGTTTT
GTGTCGTATGGTTTTACAATATCCGACTCCGGTTCACCGTTGTTGTCCTTATCGATCGTA
CATTGCACGTTGCGAATTTCGTTAAAACGCTTTATAATATTAAATGGATTCTTCAATTTC
TTGGTGAACGCATTTGGTTGATTCAATGCGTCTTCGGAGTCGGAGCTCGTGTCCAGTACC
ACTTGCCTCCGGTCGATCATGTCGTAGTTGCTGTTCATGTATATGTCTGCGTTGAAAGAC
TTGTTGAAAGTTTTAATGGCGTTCGAAAATGCCCTTCGGTGCCGAGACGTGACTTGGTCT
TTCTCGTTCAAATCTTTCAACTTCAACGCTAGCTCTTTGAGCTTGTTGAAGTTTTCCGTG
AAGGTGTCTTCGTTGACTCTTTGCCTTTTATTTTGAGATTCTTCCTCGGTATCCAATTCA
ATAGTTTCAATAACGACCGTCTCGTCAACGAGATCAAAGTTATCGGTGAGGGTCAATTTA
CACTTGTAACTGTGGTTGTAAGTCTGTATGACTTTTTGTATGGACTGTATATTTGATATC
TGCAGATTCCCCGAAGCGATCAGCCTCTTCAGCCTCCCGGCGAGGTTCTTGATTATTTGC
AAATGGTACATCCGTGTGTCGCGTGGTCGTTTCCGGGAGTTCCTCGTGCCTTGTGCGTTT
TCAACGTTCGTGTGGGCGTTCCTCATGTCCGGGTATGATCTGAAAACCGGATGCACCCTC
GGTTGGAACTGAAACCTCGGTACGAAATACTGAGGAAAGTATGGCCTCTGAAAGAACATG
TTAAAATGAAAGTAGTTGAAGTTCCCGCGCGGCCTCCACCAGTTGTAAGGTCTGTATTGA
TTGGTCATTCTTGGTGTGCTCGTGTTCGGGTAGAAATGCGTCGCGGCGGGTATTTCGTTA
CGCGAACCGTTCCCGATGCTCTTAAGCGACTCGTTTGGTTCATCGGAGGATGTGTAAGAT
AAGTTGCTCGACGTATTTCTAATGTCTTTAGTTTTAAGGTTCTCAACGTTGAGCACGTA
(1619 bp)

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