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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
751 A_BomoMG_comp143395_c0_seq1
313bp
FPKM:3.59 TPM:2.84
752 A_BomoMG_comp143417_c0_seq1
326bp
FPKM:2.70 TPM:2.14
753 A_BomoMG_comp143421_c0_seq1
1026bp
FPKM:3.88 TPM:3.07
754 A_BomoMG_comp143454_c0_seq1
211bp
FPKM:4.03 TPM:3.19
755 A_BomoMG_comp143458_c0_seq1
388bp
 hypothetical_protein_[Duganella_sp._Leaf61]
FPKM:4.01 TPM:3.17
756 A_BomoMG_comp14346_c0_seq1
219bp
 ACR_family_transporter_[Rahnella_sp._Y9602]
FPKM:1.54 TPM:1.22
757 A_BomoMG_comp143549_c0_seq1
596bp
 hypothetical_protein_[Paenibacillus_sp._FSL_H8-457]
FPKM:5.13 TPM:4.05
758 A_BomoMG_comp143557_c0_seq1
537bp
FPKM:3.33 TPM:2.63
759 A_BomoMG_comp143585_c0_seq1
410bp
FPKM:5.23 TPM:4.13
760 A_BomoMG_comp143598_c0_seq1
1276bp
 PREDICTED:_cell_division_control_protein_45_homolog_[Papilio_machaon]
GO:0000727 P double-strand break repair via break-induced replication
GO:0003682 F chromatin binding
GO:0003688 F DNA replication origin binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0005813 C centrosome
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0031261 C DNA replication preinitiation complex
GO:0031298 C replication fork protection complex
GO:0031938 P obsolete regulation of chromatin silencing at telomere
GO:0032508 P DNA duplex unwinding
GO:0043138 F 3'-5' DNA helicase activity
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
GO:1902977 P mitotic DNA replication preinitiation complex assembly
FPKM:5.39 TPM:4.26
761 A_BomoMG_comp143728_c0_seq1
1054bp
 PREDICTED:_ribosome_biogenesis_protein_BRX1_homolog_[Papilio_polytes]
GO:0000027 P ribosomal large subunit assembly
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
FPKM:4.25 TPM:3.36
762 A_BomoMG_comp143735_c0_seq1
217bp
 Transmembrane_protein_131_[Papilio_xuthus]
FPKM:16.40 TPM:12.96
763 A_BomoMG_comp143742_c0_seq1
927bp
FPKM:3.09 TPM:2.44
764 A_BomoMG_comp143773_c0_seq1
436bp
FPKM:6.69 TPM:5.29
765 A_BomoMG_comp143801_c0_seq1
1155bp
FPKM:3.61 TPM:2.85
766 A_BomoMG_comp143816_c0_seq1
1524bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.53 TPM:2.79
767 A_BomoMG_comp143856_c0_seq1
432bp
FPKM:4.96 TPM:3.92
768 A_BomoMG_comp144014_c0_seq1
535bp
 MULTISPECIES:_glycosyl_transferase_[Streptomyces]
FPKM:4.50 TPM:3.56
769 A_BomoMG_comp144037_c0_seq1
1406bp
 PREDICTED:_ribosomal_RNA_processing_protein_1_homolog_[Papilio_polytes]
GO:0000022 P mitotic spindle elongation
GO:0005634 C nucleus
GO:0006364 P rRNA processing
GO:0016072 P rRNA metabolic process
GO:0030687 C preribosome, large subunit precursor
GO:0030688 C preribosome, small subunit precursor
FPKM:4.54 TPM:3.58
770 A_BomoMG_comp144065_c0_seq1
1093bp
 PREDICTED:_crossover_junction_endonuclease_EME1_[Papilio_polytes]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0005720 C heterochromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0072429 P response to intra-S DNA damage checkpoint signaling
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:3.80 TPM:3.01
771 A_BomoMG_comp144251_c0_seq1
210bp
FPKM:2.34 TPM:1.85
772 A_BomoMG_comp144256_c0_seq1
463bp
FPKM:5.53 TPM:4.37
773 A_BomoMG_comp144421_c0_seq1
1108bp
 PREDICTED:_UPF0483_protein_AGAP003155_[Amyelois_transitella]
FPKM:4.67 TPM:3.69
774 A_BomoMG_comp144482_c0_seq1
942bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:3.64 TPM:2.88
775 A_BomoMG_comp144501_c0_seq1
486bp
FPKM:2.85 TPM:2.25
776 A_BomoMG_comp144506_c0_seq1
225bp
FPKM:3.81 TPM:3.01
777 A_BomoMG_comp144546_c0_seq1
355bp
 hypothetical_protein_L103DPR2_02227_[Limnohabitans_sp._103DPR2]
FPKM:4.83 TPM:3.82
778 A_BomoMG_comp144650_c0_seq1
585bp
FPKM:3.90 TPM:3.08
779 A_BomoMG_comp144733_c0_seq1
227bp
FPKM:6.51 TPM:5.14
780 A_BomoMG_comp144846_c0_seq1
544bp
FPKM:4.68 TPM:3.70
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