SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoMG_comp144065_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_crossover_junction_endonuclease_EME1_[Papilio_polytes]
Ontology
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0005720 C heterochromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0072429 P response to intra-S DNA damage checkpoint signaling
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.80 TPM:3.01
ORF EntryO_BomoMG28119_3prime_partial:A_BomoMG_comp144065_c0_seq1
Sequence
(Nucleotide)
AAAATATCTCCGTCGGTGACTGTGAACAATGTGTGTAATTTCCTGGCAAATTCAGGTCCA
ATGCGACGCGCCTTTGAACCCGGGACAGCGGTTCTTGATACACCGATGTTCGCCAATTCA
TTAACACTATCCGGTGAGTTAAGGGACTCATACAGGTCAAGCGGAGTTGGATATTTAGCG
CACAATGCTCTCGACGTTTCTAAACTGGAATGTGGCAGTACAGCTATCATCTGTTGCCAC
AGCCGACTGACTCCGTTGCCTTGTTTGTCGACGGTGACGCATTTCCTGTTTTCTCCCCGC
AAGTACAATTCGGATTGCTCGTCGTAAGCGCGCTTCGACATTTTGTACGGCGCCTCGGCT
ATCGCCTTGGTGTGCTGGACGATCAGCAGTGCCAGTTCGCTCGAGGAGTTCACCAGGACC
GTGTCACAGTCGGTCGTCACCAGCAAATCGGTAATAGCGAGCTCCAAATCAAGTTCCCCG
ATCAGTTTCCGGCTGCTGTTCATTGTCTTGCGGCCGCACGACTTGAAGTAATCGTTGACG
CCGAAGACGACGAGAGTCAACGCGGCGCCGGCCAGGTCCCGCACGCGGCGCACGTGCGCG
CCCAGCGACCCCGCCCGCACGTGCCGAGCCGCCTCCTCCGCAGTACACACGTACAGCGCC
AGCGAGGCGCGCTCGCTCTGCGGGCTTAGCTTCGCCAGTCCATCATCATTGATCAAGGTC
TGCGGCACCTGCCTGCTCCACATAACCAAAGCAGGGTCGCAGATACTTGATGTGGTTATG
AGATGGGCAGACGCAGAAGTCACCTCCCGTGAGACGTCCGCCATGTACCAAGCTTCAGCT
AGCACAGGATGAATCTCCACGTACATATACTTCATACATTCTCCTGGCTTATAAATCTTA
TTCATCTTTTTGTCCGCAAGTTTTATGTATCGATCTTCAATCTACCTGGTTTTCTGACTA
TTTGTTTCCCTCAATTGTGCTTTGTGCCGTATCTTTGCATTCCCTTTTCTCAATACTGTA
AAAGATAATTCTACTTATGGTGATATTGTATCGCTACATGAACTGTCGTCATAGATAATA
CACTTAATATTTA
(1093 bp)

- SilkBase 1999-2023 -